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scnpilot_p_inoc_scaffold_1719_1

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(1..579)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8L4_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 195.0
  • Bit_score: 191
  • Evalue 7.50e-46
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavi similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 193.0
  • Bit_score: 316
  • Evalue 3.70e-83
RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 195.0
  • Bit_score: 191
  • Evalue 2.10e-46

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGGCGCTTTCGCCACGGCTGGAATTCCGCCAGTCCCAGTCGCTGACATTGACACCACAGCTTATGCAGTCGATCCGGCTGCTGCAGCTCAGCCATCTCGAGCTCAACGACTTCGTTGATGCCGAGCTTCTGCGCAATCCGCTGCTTGAGCGCGAAGAGGGAGGCGGCGCCGATGATGCCGAGCCCACTGAGCCGGCCGAGCGCGCCACCGAACTCAGTGCTTATGAAGACACCGTGGCGCAAGGCGACCGGATCAAAAGCGCCGACCAGATCGCCGAAGGTTATGACACCGCGGTCGAGAACGTCTTTCCCGACCAGGCGCCGCAGGAGCTGAGCCAGGGCAGCAGCCCCGACCGCAATGGCAGTTTCGAGGGCGGGGAGGCGCCCGATATCGATCAGTTCGTCGCCTCGCGGCCGCGGCTTTCCGACCATCTCGAGGCGCAGGCCCATATGCTGCTGCGCAATCCGGCGGACAGGCTGATCGCTCTGCATCTGATCGACGGGCTCAACGAGGCCGGTTACCTCACTGTCGAGTTGCAGGCGGTGGCGGATCTGCTTGGTGCCGAGGTCGAAGATGTC
PROTEIN sequence
Length: 193
MALSPRLEFRQSQSLTLTPQLMQSIRLLQLSHLELNDFVDAELLRNPLLEREEGGGADDAEPTEPAERATELSAYEDTVAQGDRIKSADQIAEGYDTAVENVFPDQAPQELSQGSSPDRNGSFEGGEAPDIDQFVASRPRLSDHLEAQAHMLLRNPADRLIALHLIDGLNEAGYLTVELQAVADLLGAEVEDV