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scnpilot_p_inoc_scaffold_1719_10

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 6671..7297

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA59_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 202.0
  • Bit_score: 256
  • Evalue 2.70e-65
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; D similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 209.0
  • Bit_score: 383
  • Evalue 2.70e-103
clustered with transcription termination protein NusA similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 202.0
  • Bit_score: 256
  • Evalue 7.60e-66

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Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGGCTTTCGATATCGCCGAAAAGCGCTACATCAAGGAAACCGGGCTCGAAGCCCGCATCGCTCGCATTGTCGAGCCGGTGGCCAATGATCTGGGCTTTGCGCTGGTGCGGGTGAAAATCACCCCCGAAAACGGCTGCACGCTGCAGATCATGGCCGAAGATGAGCATGGCCGTTTCAACATTACCGACTGCGAGACCCTGTCCAAGGATCTCTCCCCGGTTCTGGACGTGGAAGACCCGATCGACCGCGAATACCATCTGGAAGTCTCTTCTCCGGGCATTGATCGTCCTCTGGTGCGCAAGCGCGACTACGAGCGCTTCCTGGGCCATGAGGCCAAGGTCGAGCTGCTCGACATGATCAATGGTCGCAAGCGTTTCCGTGGCGACATCCATGCCGTCGATGACGAGGGCGTCACCATTCGCCTGCCCGACGCGCCCGGCGGCACCGATCCCGACCACAAGCTGGCCTTCTCGACCATTGCCGAGGCCAAGCTGGTAATGACTGACAAGCTCATGGATCAGGCGCGCGCCGACCAGGAGCTGCACCCCATCGACGACGACGAGACCGAGACGGTCGAATATGCCGACGCCGACAATGACGATAACCTCCCCGAGGAGACCAAATAA
PROTEIN sequence
Length: 209
MAFDIAEKRYIKETGLEARIARIVEPVANDLGFALVRVKITPENGCTLQIMAEDEHGRFNITDCETLSKDLSPVLDVEDPIDREYHLEVSSPGIDRPLVRKRDYERFLGHEAKVELLDMINGRKRFRGDIHAVDDEGVTIRLPDAPGGTDPDHKLAFSTIAEAKLVMTDKLMDQARADQELHPIDDDETETVEYADADNDDNLPEETK*