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scnpilot_p_inoc_scaffold_2143_12

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(12306..13055)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhiz similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 249.0
  • Bit_score: 386
  • Evalue 2.90e-104
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB18_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 248.0
  • Bit_score: 292
  • Evalue 3.10e-76
ribosomal RNA small subunit methyltransferase E similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 248.0
  • Bit_score: 292
  • Evalue 8.70e-77

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGCCCCGTTCTCATTCTGCGCTGCCGCGCCTGTTCGTCGATACCGACCTTGCTGCCGGCGCCGCCCTGACGCTGGGCAAGGAACAGTCGCTTTACCTGGCCGCGGTCCTGCGCAAGGGCGTCGGCGACAGCGTGGTGCTGTTCAACGGCCGCGACGGCGCCTGGCTCTGCCGGCTCACCGGCGATTCTAAGAAATCGGTCGTTCTGGAAGTCGTCGAGCAGATCGCGCCGCAGACTCGGCCCTCTGATCTCTGGTACGGGTTTGCGCCGCTCAAGACCGAGCGGCTGGATTATGTGATCCAGAAGGCGGTGGAGATGGGCGCTGGGATTATCCAGCCTGTGACCACCCAGTTTACCCAGGTGCATCGACTCAAACCCGAAAAGCTCGCCGCCAATGCCATGGAAGCGTCGGAGCAATGTGAAGTGCTGAGCGTGCCGGAGATCGCGCCGGAAATCGGTCTCGATGCGCTGTTGAGCCAATGGCCGCAAATGCATGGCGACCGAGTGCTGGTATTTGCCGACGAGGGTGAAGCGTCGTCGTCGCCCCTGGGCGGCCTGCAAAACCTGGTTGGCCGCAGGATAGGCCTGTTGATCGGCCCCGAAGGCGGATTTTCTGACAGCGAACGCGAACGGCTACGCAGACTGCCGTTTGTTTTGCCGATCAGCCTCGGACCGCGTATCCTGCGCGCCGATACTGCCGCCGTGGCGGCAATGGCGATTATTCAGGCGACCATCGGCGATTGGCGATAA
PROTEIN sequence
Length: 250
MPRSHSALPRLFVDTDLAAGAALTLGKEQSLYLAAVLRKGVGDSVVLFNGRDGAWLCRLTGDSKKSVVLEVVEQIAPQTRPSDLWYGFAPLKTERLDYVIQKAVEMGAGIIQPVTTQFTQVHRLKPEKLAANAMEASEQCEVLSVPEIAPEIGLDALLSQWPQMHGDRVLVFADEGEASSSPLGGLQNLVGRRIGLLIGPEGGFSDSERERLRRLPFVLPISLGPRILRADTAAVAAMAIIQATIGDWR*