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scnpilot_p_inoc_scaffold_2502_1

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(3..542)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 177.0
  • Bit_score: 301
  • Evalue 6.70e-79
tRNA pseudouridine synthase A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC8_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 177.0
  • Bit_score: 270
  • Evalue 1.20e-69
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 177.0
  • Bit_score: 270
  • Evalue 3.30e-70

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCACGCTACAAGCTCATCATCGAATATGACGGAACCCCGTTCTGCGGCTGGCAGCGGCAGGCGGACCGGATGAGCGTGCAGCAGGCGCTGGAAGAGGCCGTTGCAAGATTTTCCGGCGAGGTGGTGGTGACGCAGGCGGCCGGGCGCACCGATGCCGGCGTGCATGCCCTGGGCCAGGTGGCGCATTTCGACCTCGGCAAAGAGTGGGACCCGTTCCGCATTCGCGAGGCGCTCAACTATCATCTGCGGCCCCATCCGGTGGTTGTGATCGACTGCGCGGCGGTTGGCCAAGAGTTCGAGGCGCGGTTTTCGGCCAAGGCGCGGCATTATGAATATCGCATTCTCAACCGCCGGGCTCCGGCAGCGATCGAGCGCAACCAGGTCTGGCACGTTGCCAAGCCGCTCGATGTGGACCGCATGCATATTGCTGCGCAGCTGATCCTGGGGCAGCACGATTTCTCCACCTTCCGCTCGGCAGAGTGCCAGGCCAATTCGCCGGTCCGCACGCTCGACGCCTTCGAGGTGCAGATGCGGCGC
PROTEIN sequence
Length: 180
MARYKLIIEYDGTPFCGWQRQADRMSVQQALEEAVARFSGEVVVTQAAGRTDAGVHALGQVAHFDLGKEWDPFRIREALNYHLRPHPVVVIDCAAVGQEFEARFSAKARHYEYRILNRRAPAAIERNQVWHVAKPLDVDRMHIAAQLILGQHDFSTFRSAECQANSPVRTLDAFEVQMRR