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scnpilot_p_inoc_scaffold_2502_9

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 7099..7650

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F122_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 174.0
  • Bit_score: 232
  • Evalue 4.80e-58
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KFC70591.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.; similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 183.0
  • Bit_score: 288
  • Evalue 7.80e-75
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 174.0
  • Bit_score: 230
  • Evalue 3.00e-58

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGTCCGCCCAAGCCTCCCGAGACGAAATCTCCGATCTGCTCGCCCGCTGCGTCTTGCGCGACCAGGCCGCTTTTCGTGATCTCTACGATCGCACCAGCGCGAAACTGTTCGGCGTCCTCCTGCGTATCTTGAAAGACCGGGCCGAAGCAGAGGAAGCGATCCAGGAAGTGTATGTAAAGATCTGGTATCGGGCCGATCGGTTCGTTGCCGGCCAGGCCAGCCCCATAAGCTGGCTGGTGGCCGTCGCCCGCAATCATGCCCTCGACATTTTGCGCACCCGCCGCCCCGCCGCGGCCGATATCGACACCGTTCTCGATATCGCCGACCCTGCGCCTTCGCCCGAACGCATGACGGCGGACAGCCAGGATCGCGCGCGCATCGAACACTGTCTCGGCACCCTCGAAAGCGATCGCGCCGATGCCGTGCGCGGCGCCTATCTCGATGGCTATTCCTATGAAGAATTGGCTTCCCGTCATGCCGTGCCGTTGAATACCATGCGTACATGGCTGCGGCGCAGCCTCATCAAGCTGAAAGACTGTCTGGCAGCATGA
PROTEIN sequence
Length: 184
MSAQASRDEISDLLARCVLRDQAAFRDLYDRTSAKLFGVLLRILKDRAEAEEAIQEVYVKIWYRADRFVAGQASPISWLVAVARNHALDILRTRRPAAADIDTVLDIADPAPSPERMTADSQDRARIEHCLGTLESDRADAVRGAYLDGYSYEELASRHAVPLNTMRTWLRRSLIKLKDCLAA*