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scnpilot_p_inoc_scaffold_3739_1

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(3..527)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Bartonella tamiae RepID=J0R2G2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 175.0
  • Bit_score: 294
  • Evalue 5.70e-77
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina. similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 175.0
  • Bit_score: 330
  • Evalue 1.70e-87
rpoE; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 171.0
  • Bit_score: 291
  • Evalue 1.40e-76

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGAGCGCCGAAACTCCCTCCTTCAAACGCGAAATGCTGGCGACCTTGCCCAGCCTGCGTGCCTTTGCGGTGTCGCTGACCGGCAAGCACGACAAGGCCGATGACCTCGTTCAGGATACGGTCATGAAAGCCTGGGCCAAGCAGTCCAGCTTCGAGATGGGCACCAATATCAAGGCCTGGCTCTTCACCATCCTGCGTAACGAATTCTATAGCCAGATGCGCAAGCGCGGTCGCGAAGTGCAGGATTCCGATGGGGTTTTCACCGAACGCCTGTCGGTGCATCCGTCGCAATACGGCTCCATGGATCTGGAAGATTTCAAGAAGGCGCTGTCGCAGTTGCCCGATGACCAGCGCGAAGCGGTGATCCTTATCGGCGCCTCCGGCTTCTCTTATGAAGAAGCTGCCGAAATCTGCGATTGCGCTGTCGGTACCATGAAGAGCCGCGTCAGCCGGGCCCGCTCGCGCCTGGCGGAGATGCTGAAGATCTCGGGCGAATCCGACTATGGCCCCGATGCCGTGTCAGCC
PROTEIN sequence
Length: 175
MSAETPSFKREMLATLPSLRAFAVSLTGKHDKADDLVQDTVMKAWAKQSSFEMGTNIKAWLFTILRNEFYSQMRKRGREVQDSDGVFTERLSVHPSQYGSMDLEDFKKALSQLPDDQREAVILIGASGFSYEEAAEICDCAVGTMKSRVSRARSRLAEMLKISGESDYGPDAVSA