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scnpilot_p_inoc_scaffold_5912_6

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 4516..4884

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 122.0
  • Bit_score: 239
  • Evalue 2.80e-60
DNA-directed RNA polymerase subunit omega n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R618_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 122.0
  • Bit_score: 205
  • Evalue 3.20e-50
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 122.0
  • Bit_score: 203
  • Evalue 2.60e-50

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGGCACGCGTCACCGTTGAAGACTGCATCGAGAAGGTCGAGAATCGCTTCGATCTCGTCCTCATGGCCGCTCACCGCGCGCGCATGATTTCCTCCGGCGCGCAGATCACCGTTCCCCGCGACAATGACAAGAATCCCGTCGTTGCCCTGCGTGAAATCGGCGATGGCACCATTTCTCCTGATGATTTGCACGAAGATCTGATTCATTCGCTGCAGAAATATGTCGAAGTCGACGAACCCGAATCCAGCGCCGCTCCGCTGATCGAGAGCGCCGGTGATGACGATTCGATCAATTTCGATACCATCAGCGAAGAAGAACTGCTGCGCGGCATCGAAAGCCTCGCTCCGCCGGAAAGGCGCGATGACTGA
PROTEIN sequence
Length: 123
VARVTVEDCIEKVENRFDLVLMAAHRARMISSGAQITVPRDNDKNPVVALREIGDGTISPDDLHEDLIHSLQKYVEVDEPESSAAPLIESAGDDDSINFDTISEEELLRGIESLAPPERRDD*