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scnpilot_p_inoc_scaffold_6348_1

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 3..1316

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding LysM (Fragment) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQL7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 480.0
  • Bit_score: 227
  • Evalue 3.70e-56
LysM domain protein {ECO:0000313|EMBL:KFC71244.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 334.0
  • Bit_score: 243
  • Evalue 4.10e-61
LysM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 452.0
  • Bit_score: 154
  • Evalue 8.50e-35

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
AGCGAGCCGGCGGCACCCGCGAGCGAGCCCGCCGCTGCACCCACCACAGAAACGCCTGCTCCGCCGGCCGCCGGCACGCCGGTCCAGACCGCTATTGCCGCGCCGCCTGCTGCGCCGCCTGAGGCTGCCGCAGCAACGCCGACCCCGGCCGTTGCCGCGCCGGAAAGCACTGCGCCTGCCGCTCCCGCAGAGCAAGCTGCGCCGACGCCTGAACCTGCAACGCCGGCAGCGACCGAAACCGCTGCCGCCACGCCGCAGCTGGAACCGGAGCCGGAATCTGCCCCCGCCGCCACCACCACCGAGGTGGCGCCCCAGACGGCCGCGGTCGCGCCGCAGCCGGAAGTTGCGCCTCCTGTCGCGCCACCAGCATTGGCCGACACCGTTACCACCATCGACGCCATCGAAATCGAAGGTGCGCGCACCTTCTTCGCAGGCGGCGGTCCCAATGGCGGCATCATCCGGCTCTATGTCGATGATGTGCATATTGCCGATGCCGTCGTCGACAATGGCCGCTGGCTGGTCGAAGCCGGTTCGGTGCTGAGCAAGCCGAGCCAGCGCATCCGTGCAGACCTGCTGCAGCCCGGCTCCGCCACCGTGCTGTCGCGCGCCGAGGTGGATTTCGTGGTCCAACTGCCCGAAACCGAGCAGCCGTCCATTGCCGTCGCCGACGCCCCTGTGGCGCCTGCTGCGCCCGCGCCCCAACCCGCAGCCACTGCGCCCGCTGCCGCGCCGGCCGAAGCGCCAGCGAGCGGCGAAGCCACTGCCGCGCCGGCCCAATCGGCATCGGCCGTGCCGACGCAGCCCGCGCTGTCAGCGCCCGCTGCCCCGGCCTCCAGCCAGCAGGAGCCAGCGGTGCCTCCGCCAGAAGTTCCGGCGACGGCACCGTCTGTACAGCAGGCCCCTGCCGCCGCGCCCGCGGCAGCCACGCCGGCGGCACAGCCCGCGCTAGCAGCGCCGCAGCCTGAAACGGCTCCGGCCGCACCGCCGGCCGAGCCTGCCAGTGCTCCGCCCGCTCCGTCGTCGCCTGCCACCGCATCCGAGCCTGCGCCTGCAACGGCAGCGCCGGTCCCTGCCGCCCAGCCGCAACCGGCTGTGCCCACTCTGGTGGCGGTGTCGGTCGGCGATCCCGACGCCCAGCGCTTCGCCGCCGGCAAGGCCATCATTCGTCGCGGCGACAATCTCTGGACCATCGCCCGCCGTGTCTATGGCGAAGGCATCAAGTACACCACGATCTACGAGGCCAATACCGGCCAGATCCGCGATCCGCATCGCATCTATCCAGGCCAGGTGTTCGATCTGCCCACCGGCCAGTAA
PROTEIN sequence
Length: 438
SEPAAPASEPAAAPTTETPAPPAAGTPVQTAIAAPPAAPPEAAAATPTPAVAAPESTAPAAPAEQAAPTPEPATPAATETAAATPQLEPEPESAPAATTTEVAPQTAAVAPQPEVAPPVAPPALADTVTTIDAIEIEGARTFFAGGGPNGGIIRLYVDDVHIADAVVDNGRWLVEAGSVLSKPSQRIRADLLQPGSATVLSRAEVDFVVQLPETEQPSIAVADAPVAPAAPAPQPAATAPAAAPAEAPASGEATAAPAQSASAVPTQPALSAPAAPASSQQEPAVPPPEVPATAPSVQQAPAAAPAAATPAAQPALAAPQPETAPAAPPAEPASAPPAPSSPATASEPAPATAAPVPAAQPQPAVPTLVAVSVGDPDAQRFAAGKAIIRRGDNLWTIARRVYGEGIKYTTIYEANTGQIRDPHRIYPGQVFDLPTGQ*