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scnpilot_p_inoc_scaffold_6408_4

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(1331..3610)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=46914 species="Bacteria; Proteobacteria; Alpha similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 758.0
  • Bit_score: 1337
  • Evalue 0.0
Ribonuclease R n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBC6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 764.0
  • Bit_score: 1031
  • Evalue 0.0
  • rbh
3'-to-5' exoribonuclease RNase R similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 764.0
  • Bit_score: 1031
  • Evalue 0.0

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2280
ATGGCCAAAACACCAAAATCCAAAAACACTTCCGGCCCCAAGCGTGCTGTGCAGACGCGCGCCTCGGAACTCCCGAGCCGCGAGCAGCTCCTCGCTGCCCTGGCTGAACAGGACGACATCAAGGGCAAGCGTGACCTGGCAAAAGTGTTCGGCATTCGGGGGGACATGCGCCGGCCATTCAAGGCCATGCTAGCCGAGCTGGAAGGCGAAGGGGTGATCACCCGGACCCGCAAGGCGCTGCGCCGCACCGCGGCCCTGCCCCATGTGACTGTGCTCGATATTCCCAGCGATGCCGATCCGGACAATCTGCATGCCTTTCCGGCGCAGTGGAATCCTGAAGAAGGCGAGATGCCGCGCGTTCGGGTCCTGGTCGATGCCCATTCCAGGGTAGCCCCTGCCCCCGGCGACCGCATCCTCGCCCGGATCGATGCGGGCGACGGTCCCGTTCCGGACTATTCAGCCAAGCCGATGAAGGTGCTCGACAAGCCACGTCGGGCGCAGATCGGCATCGTGCGCATGGACAATGAGGGCGCACGCCTCATTCCGGTGGATCGCAAGCAGAAGGAAATGCGCATTCCGCTGGGCGATCTTGGCAATGCCGCCGATGGCGATCTGGTCGAGGTCGAGGTGAAGCTGTCCGGCCGGCTGATGATCCCGCGCGCTCGGGTGACCAATGTGATCGGCAACCCGGCCTCGGAGGGCGCGGTTTCCCTGATTGCCATCCACAGCCTCGAAATTCCGTACAAGTTCCCCAATAGCGTCATCCGCGAGGCAGAAGAGGCCAAGGAGGCCACGCTTAAAGGGCGCGAAGACTGGCGCGATCTGCCGCTGGTGACGATCGACCCGCCTGACGCCAAGGATCACGATGACGCCGTGCACGCCGCCAAGGATGAGGATGCAGCCAATCCCGGTGGTTTCGTTGTCACTGTCGCCATTGCGGACGTCGCCGCCTATGTACGCCCTGGCACAGCGCTGGACCGGGAGGCCTATCTGCGCGGCAATTCGGTCTACTTCCCCGACCGCGTGGTGCCGATGCTGCCGGAGCGCATTTCCAACGATCTGTGCTCGCTGAAGCAAGGAGAAGCACGCGCCGCGCTCGCCGTGCGTATGGTTCTGGGGGCCGATGGCCGCAAACGCAGCCACACTTTCCACCGCATTCTCATGCGCTCGGCCGCTAAACTCAGCTACCAGCAGGCGCAAGCGGCCATCGACGGCAATCCCGATGATCAGACAGGACCACTGCTGGAGCCTATCCTGCGGCCGCTCTGGGCGGCCTATGCGGCGATGGCAAAGGCGCGCGACCATCGTGGGCCGCTCGATCTCGACCTGCCGGAACGCAAGATCGTGCTCGATGGCAAGGGCATGGTGGCAGACATCCGCATTCCCGAGCGGCTGGACGCGCACAGGCTGATCGAAGAGATGATGATCCTGGCCAATGTGGCCGCGGCCGAGACGCTGGAGCAAAAGCGCAGCGAATTGCTCTATCGCGTGCATGACGAGCCATCCTCGGAAAAGCTGCAGGCCCTGCGCGATTTCCTGGGGAGCCTCGACATTTCGGTCAAGAAAACTGATGCGGTGCGCGCTTCGGACTTCAACGGCATTCTTCATCAGGCGCGCAAGGCCGGCAATATCGAGCAGGTCAGCGAGATGGTCCTGCGAAGCCAAGCGCAGGCCGAGTATGCGGCGGAGAACTATGGTCATTTCGGCCTCAATCTCGACCGCTATGCCCATTTCACCTCACCCATTCGTCGATATGCCGACCTCATCGTGCACCGAGCGCTGATCCGGGCACTCGGATTGGGCGACGATGGCCTGAGCGAGCAGGAAGCCACGAAGCTCCCAGGCATTGCCCAGCATATTTCGGCCACCGAACGCCGCGCCATGATGGCGGAACGCGAGACCTCTGATCGTCTGCTGGCGCAGTTCCTGGCGACCAAGATCGGCGCTCGATTCGACGGCCGGATCTCTGGCGTTACCCGGTCGGGCCTCTTCATCCGCCTCATCGAAACCGGGGCCGATGGCTTTGTGCCGGCTTCGACGCTGGGCCAGGACTATTATCGCTATGTCGAGGAACGCCAGGCGATGATCGGCGAGCGCTCCGGCGAAACATTTGCGCTCGGCGACCGCGTCGAGGTGCGTCTGCTCGAGGCCGCCCCGGTAGCCGGGGCACTCCGCTTCGAGCTCCTGACCGAAGGTAGGCGCGGCAATCCGCCATCTGGCCGCCGGGCCTCGAAGGGCCCATCTAGGAGCTTCGGCCAAAAGGGTCGGAGAAAGAGGTAA
PROTEIN sequence
Length: 760
MAKTPKSKNTSGPKRAVQTRASELPSREQLLAALAEQDDIKGKRDLAKVFGIRGDMRRPFKAMLAELEGEGVITRTRKALRRTAALPHVTVLDIPSDADPDNLHAFPAQWNPEEGEMPRVRVLVDAHSRVAPAPGDRILARIDAGDGPVPDYSAKPMKVLDKPRRAQIGIVRMDNEGARLIPVDRKQKEMRIPLGDLGNAADGDLVEVEVKLSGRLMIPRARVTNVIGNPASEGAVSLIAIHSLEIPYKFPNSVIREAEEAKEATLKGREDWRDLPLVTIDPPDAKDHDDAVHAAKDEDAANPGGFVVTVAIADVAAYVRPGTALDREAYLRGNSVYFPDRVVPMLPERISNDLCSLKQGEARAALAVRMVLGADGRKRSHTFHRILMRSAAKLSYQQAQAAIDGNPDDQTGPLLEPILRPLWAAYAAMAKARDHRGPLDLDLPERKIVLDGKGMVADIRIPERLDAHRLIEEMMILANVAAAETLEQKRSELLYRVHDEPSSEKLQALRDFLGSLDISVKKTDAVRASDFNGILHQARKAGNIEQVSEMVLRSQAQAEYAAENYGHFGLNLDRYAHFTSPIRRYADLIVHRALIRALGLGDDGLSEQEATKLPGIAQHISATERRAMMAERETSDRLLAQFLATKIGARFDGRISGVTRSGLFIRLIETGADGFVPASTLGQDYYRYVEERQAMIGERSGETFALGDRVEVRLLEAAPVAGALRFELLTEGRRGNPPSGRRASKGPSRSFGQKGRRKR*