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scnpilot_p_inoc_scaffold_6536_2

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 1086..2012

Top 3 Functional Annotations

Value Algorithm Source
AraC-type DNA-binding domain-containing protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REZ9_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 300.0
  • Bit_score: 158
  • Evalue 1.50e-35
Transcriptional regulator AraC {ECO:0000313|EMBL:GAJ28538.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 301.0
  • Bit_score: 232
  • Evalue 6.60e-58
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 300.0
  • Bit_score: 158
  • Evalue 4.10e-36

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Taxonomy

Acidomonas methanolica → Acidomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
TTGCGAACGCTGCCCAGCTTCTCCATCAATGCCTTTGCCGACGCATCCGAACAGGAACGCGGGCTTTTGGGCTGGGACCAGCGCTATACGCAGATGGGAGCCGGCCGCTTCGAGGGCACGGTGGTGCGCATGGAGCTGGGGCGCGTCAGTATCTGGGAAGAGCGGCTCAATGTCAGCGTGGCCGAAACCACGGCGCCGCCAGCCGGAAAGGTGGTGCTGGTGCTGCCGGCACCTGCGGTGGACAGCCGCATCAACGGCGCCAAGCGTGAGGGGCCCGGCTTTCTGCATATGGGCGGACACGAGATCAATGTGGTCACCTCCGAAACCACGCAGGGCTATTTCGTCACCCTCGACGAAAAGGACCTGCCCGGTCTCGACCGGCGGCGCACCGGGCCGCTTTGCAGCATCGAGGCCTATCCCGGCGCGCATGAGATGAGCAGCTGGATCGCCTCGATGATGTCGATGGCGCCGGAGGGCATGCGCCGATCACCACGCGAATTCGGCACGGTCCTGCCCGATTTCATCGTCGACCGAGTCTCAGACCTGTGCACCTTTCTCTCGAGCATGGACCACAAGCCGCTGACCGAGAGCTATGCGCATGCCGTGGTGCGCAAGGCGCGCAAGGTCATCGAGGCCAAGTCACATGGGCCTTTGAGCGTGGCCGAGCTGGCCAGAGCCATCGACCTGCCCGAACATGTGGTGCGCAGCGCCTTTATCCAGGCCGTCGGCATAAGCCCCCTGATCTGGCTGCGCCGGCACCGCCTCGATCAGGCGCGACGTGCCATGCTGCGGCCGGAGGAGGCGCGTAAGGGTGTGGCGCAGATCGCCATGGAAAACGGCTTTTTCCACCTTGGGCGCTTCGCGGCCTATTACACGCAGACCTTCCACGAACTGCCGATCGAAACCATTCGCAGCGTCATCGGCTAA
PROTEIN sequence
Length: 309
LRTLPSFSINAFADASEQERGLLGWDQRYTQMGAGRFEGTVVRMELGRVSIWEERLNVSVAETTAPPAGKVVLVLPAPAVDSRINGAKREGPGFLHMGGHEINVVTSETTQGYFVTLDEKDLPGLDRRRTGPLCSIEAYPGAHEMSSWIASMMSMAPEGMRRSPREFGTVLPDFIVDRVSDLCTFLSSMDHKPLTESYAHAVVRKARKVIEAKSHGPLSVAELARAIDLPEHVVRSAFIQAVGISPLIWLRRHRLDQARRAMLRPEEARKGVAQIAMENGFFHLGRFAAYYTQTFHELPIETIRSVIG*