ggKbase home page

scnpilot_p_inoc_scaffold_6597_3

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(924..1859)

Top 3 Functional Annotations

Value Algorithm Source
Putative iron-siderophore binding lipoprotein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RDK5_CLAMS similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 300.0
  • Bit_score: 187
  • Evalue 2.30e-44
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP91937.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michi similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 300.0
  • Bit_score: 190
  • Evalue 4.90e-45
iron-siderophore binding lipoprotein similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 300.0
  • Bit_score: 187
  • Evalue 6.40e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGTCGATCAGATTCGCGTTTGCCGTGCTGGCCTGCAGCTTTGCAATGGTCGCATCCAGCTACAGCCAGGACGGGGCATTTCCCGTCACCGTCGAACATGCGCTGGGAACGATCACGATCGAGGCGGCGCCAGAGCGCGTCATCGCCCTCATCGATCGGGATGCCGATACCCTTCTGGCGCTCGGCGTGCAGCCGGTCGCGATTCGCAGCAATTTCGGCTTCGAAGCTGGCGTCGGGCCATGGTCGGAGAAACTGTTGACCAGCGAGCCTATCGTCTGGACGGGGCGAGAGCTGGATTACGAAGCCATCGCCGCAGCTAGGCCCGATCTGATCGTCTTTACCCATTCGGGTGGCGACGAGGACGAATACGCATTCCTGAGCCAGATCGCGCCAACGGTCTATCTGCCCCATGGAGCGGCGCCATGGTCGGCCACGACCGAACAGACGACGTTGACCATCGCTGCAGCGCTCGGACGGCGCGATGATGGTCTGGCGCTGCTGAACACGCTCGAAAAGCACCTGGCAGAGCAGAAAGCAGCTCACCCGGAATTTTCGGGAAAGACCGCAAACTATCTCGACATCTTCCCCGGCGGCATCTGGAGCTACGGCGAGTACCACATAGTCAACCAGACGATTTACGCCCTCGGCTTCTCACCGATCGCCGCCACGGCGCAGGTACCGGAGGGCGAGGCCAATATAACCATATCCGCCGAACTGCTGCCGGACTACGACGCCGATATCGTGGTGGCTTTCCCCTATGGCCGCAGCTTTGACGCGCTGCTCGCAGAGACACCTACGCTGGATACGCTGACCTCGGTGAAGCAAGGTCGCTTCATTCTTCTCGGTGACCTGGCCTTTTCGGCAGCGTCAGTGGTGTCGATCCCCTATGCCGTCGACCAGTTGGTACCGCAATTCGCGGCCGCATTGGCACCATAA
PROTEIN sequence
Length: 312
MSIRFAFAVLACSFAMVASSYSQDGAFPVTVEHALGTITIEAAPERVIALIDRDADTLLALGVQPVAIRSNFGFEAGVGPWSEKLLTSEPIVWTGRELDYEAIAAARPDLIVFTHSGGDEDEYAFLSQIAPTVYLPHGAAPWSATTEQTTLTIAAALGRRDDGLALLNTLEKHLAEQKAAHPEFSGKTANYLDIFPGGIWSYGEYHIVNQTIYALGFSPIAATAQVPEGEANITISAELLPDYDADIVVAFPYGRSFDALLAETPTLDTLTSVKQGRFILLGDLAFSAASVVSIPYAVDQLVPQFAAALAP*