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scnpilot_p_inoc_scaffold_8851_1

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 16..279

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=RS20_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 87.0
  • Bit_score: 135
  • Evalue 2.90e-29
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensi similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 87.0
  • Bit_score: 160
  • Evalue 9.00e-37
rpsT; 30S ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 87.0
  • Bit_score: 135
  • Evalue 8.10e-30

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGCCAATACGCCGTCAGCAAAGAAGGCGACCCGCAAGATCGCTGCCCGCACCGCGATCAACAAGTCGCGCCGTAGCCGCGTGCGCACCTTTATCCGCAAGGTCGAGGAAGCGATCACCTCCGGCGATCACGCCGCTGCTTTCGCTGCGCTCAAGGCTGCCGAGCCGGAAATCCACCGCGCAGCCGGCAAGGGCATTGTCCATACCAACCTTGCTTCCCGCAAGGTCAGTCGTCTCAATAGCCGCGTCAAGGCGCTGGCCTGA
PROTEIN sequence
Length: 88
MANTPSAKKATRKIAARTAINKSRRSRVRTFIRKVEEAITSGDHAAAFAALKAAEPEIHRAAGKGIVHTNLASRKVSRLNSRVKALA*