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scnpilot_p_inoc_scaffold_11246_1

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: comp(1..2499)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=46914 species="Bacteria; Pro similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 832.0
  • Bit_score: 1503
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R912_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 833.0
  • Bit_score: 1189
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 833.0
  • Bit_score: 1189
  • Evalue 0.0

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2499
ATGGTTCCGCCCGTCCGCACATTGTCCAATGTGCCGGACGGAATGCAGCCCCTGGTGCTGTCACGGCTGGTAGAGCAGCGGCTGAAGGCCGCGCCGGAAGATGCCGCGGCATTGGTTTTCGTGGCGCGCGACGGCCGGCGCATGCAGCGCATGGCCGAGGTGCTTGGCGCCATGCTGCCCGGCCACACCATCCTGACGCTGCCGGCCTGGGACTGTCTGCCCTATGACCGGGTCTCGCCGAACAACGTGACCATTGCCGCGCGCATGAATGCGCTGGCTGCGCTTGCCGGCGCTACCAAGGGCGCGATTGTACTGACTGCGGTCAATGCGCTGATCCAGAAGTTACCGCCGCGCGACATGGTGGAAACCATGTCGTTTTCTGCGGCTGTTGGGCGGGTCGTGGACAGCGACAAGCTCGTGGCCTGGGCTGCGAATAATGGGTATCTGCGGGTGCCCACTGTTCGCGAGAGCGGGGAATTCGCGGTGCGTGGCGGGTTGGTGGACCTGTTCCCGGCCAGCTTCGATTCGCCTTTGAGGTTCGACTTCTTTGGCAGTCAGCTGGAATCCATTCGCACATTCGATCCGGACAGTCAGCGCACCACGGGCACACTGAAACGCGTTGATCTGACCCCGATGAGCGAGGTGATGCTCAACGAGGAAACGATCAGGCGCTTCCGCCAGAACTACACGGCAGCCTTTGGCGGCAACACCGTCGATGACACGCTTTACGCCTCTGTCAGCGGTGGCGCCCGCTATTCCGGCACCGAGCACTGGCTGCCCTTCTTCTACGACCATCTGGATCGGCTGTCGGATTATGTTGGCGACGCGCCATTCGTGTTCGACGATCAGGCGGCAGAGGCCTATGCCGAACGCGTCGAGCAAATCCGTGACTACTATCAGGCGCGTGAGGCAGCACGCCTCGCGCCGCCTGTCGCGGGCAGTGGCGCTCCTTACAAGCCGATCAAGCCCGATCTGCTTTACGACCTGGAGCAACATCCCTATGCGCTGGCCGGTGCCAGCGTCGTCCAGCTCTCGCCGTTCCTTTCGCCACAGGCCGGCAAAGCAGATGACGTTGGCGGGCGTATCGCGCCCAGTTTTGCGGCCGAACGGCAGGCTTCCGACATCAACCTGTTCCAGGCGGTGGTGGATCGATTGCTGGCCGAGCGTCGCGATGGTCGTCGAGCTATTCTCGCCTGCTGGAGCGCGGGCACACGCGATCGCATGGTGCAGGTGCTCAAGGATCACGGTCTTACTAATCCGCGCCTTGCGGAAAACTGGCGTGACGCTGAGACCACCAGCGCCGCCACGACCTCGCTCGTGGTGCTGCCGCTTGAAACCGGCTTCGAGACCAAGGACCTCCTGGTCCTGTCCGAGCAGGACATTCTTGGCGAGCGCATCCTGCGTCCACAGCGCAAGAAGAAGGCGTCGGACGCGCTGACCGAGGCGGCGTCGCTCAATGCTGGCGATCTTGTGGTCCACGTCGATCACGGCATCGGCCGCTTTATCGGGCTCAAGGTGATCGAAGCCGGTGGTGCGCCGCATGAATGCGTCGAACTGCAATATGCCGGCGACACCAAACTTTATCTGCCTGTCGAAAATATCGAGCTTCTGACCCGCTACGGCTCGGACGATTCTTCGGTAGCATTGGACAAGCTGGGCGGCGTCGCCTGGCAGGCCAAGAAGAGCAAGCTCAAGCAGCGCATCCGCGAAATGGCCGAGCAGCTCATCAAGCTTGCGGCGCAGCGTCTCCTGGTCAAGGCCGATGTGGTCGATCTCAATCCCGGCGCCTACGAGGAATTTGCGGCGCGCTTCCCCTATGAGGAGACCGAGGACCAGCTTAACGCCATCGGTGCGATATTCGACGACCTGACCTCGGGCAAGGTCATGGACCGGCTGGTTTGCGGCGATGTGGGCTTCGGCAAGACCGAAGTGGCCCTGCGCGCCGCCTTTGCGGTGGCGCTCAGCGGCAAGCAGGTTGCCGTGGTGGTGCCGACCACTCTATTGGCGCGCCAGCATTTCAAGACTTTCGCCGAACGCTTCCAAGGATTGCCGGTTCGCGTGCGCCATGCTTCGCGCATGGTGCCTGCGGCCGAACTTAAGGCGACCAAGGAGGGCATGGCCGACGGGCAGGTGGATATTGTCGTCGGCACCCATGCCCTGCTGAGCAAGTCGATCAAGTTCAAGGATCTTGGCCTTCTGATCATCGATGAAGAGCAGCATTTCGGTGTCGGTCACAAGGAGCGCCTCAAGGAACTCAAGGCTAATGTGCATGTGCTGACGCTAACGGCGACGCCAATTCCGCGCACGCTGCAGCTGGCGCTGACCGGGGTGCGCGATCTCAGCCTCCTGGCAACGCCGCCGGTCGACCGCCTGGCCATCCGTACCTTCATCTCGCCCTTCGATCCGCTCTCCATCCGCGAGGCTCTGCTGCGCGAGAAATATCGCGGTGGGCAGAGTTTTTATGTCGTGCCGCGCATCAAGGATCAGGCCGATATCGCC
PROTEIN sequence
Length: 833
MVPPVRTLSNVPDGMQPLVLSRLVEQRLKAAPEDAAALVFVARDGRRMQRMAEVLGAMLPGHTILTLPAWDCLPYDRVSPNNVTIAARMNALAALAGATKGAIVLTAVNALIQKLPPRDMVETMSFSAAVGRVVDSDKLVAWAANNGYLRVPTVRESGEFAVRGGLVDLFPASFDSPLRFDFFGSQLESIRTFDPDSQRTTGTLKRVDLTPMSEVMLNEETIRRFRQNYTAAFGGNTVDDTLYASVSGGARYSGTEHWLPFFYDHLDRLSDYVGDAPFVFDDQAAEAYAERVEQIRDYYQAREAARLAPPVAGSGAPYKPIKPDLLYDLEQHPYALAGASVVQLSPFLSPQAGKADDVGGRIAPSFAAERQASDINLFQAVVDRLLAERRDGRRAILACWSAGTRDRMVQVLKDHGLTNPRLAENWRDAETTSAATTSLVVLPLETGFETKDLLVLSEQDILGERILRPQRKKKASDALTEAASLNAGDLVVHVDHGIGRFIGLKVIEAGGAPHECVELQYAGDTKLYLPVENIELLTRYGSDDSSVALDKLGGVAWQAKKSKLKQRIREMAEQLIKLAAQRLLVKADVVDLNPGAYEEFAARFPYEETEDQLNAIGAIFDDLTSGKVMDRLVCGDVGFGKTEVALRAAFAVALSGKQVAVVVPTTLLARQHFKTFAERFQGLPVRVRHASRMVPAAELKATKEGMADGQVDIVVGTHALLSKSIKFKDLGLLIIDEEQHFGVGHKERLKELKANVHVLTLTATPIPRTLQLALTGVRDLSLLATPPVDRLAIRTFISPFDPLSIREALLREKYRGGQSFYVVPRIKDQADIA