ggKbase home page
Advanced Search
Search Help

scnpilot_p_inoc_scaffold_11937_2

Organism: SCNpilot_P_inoc_Devosia_62_4

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 211..4134

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 999.99
  • Bit_score: 2532
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC48_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 999.99
  • Bit_score: 2224
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 999.99
  • Bit_score: 2224
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3924
ATGAATCATCATTCCCACGTCATGGACCCGTTCAACCCGGCCGTCCCCGTCCAGACCTTCGATCAGATGAAGATCTCGATCGCCAGCCCGGAAAAGATCCTTTCCTGGTCCTATGGCGAGATCAAGAAGCCCGAGACCATCAACTATCGTACGTTCAAGCCTGAGCGCGATGGTCTGTTCTGCGCGCGCATCTTTGGCCCCGTGAAGGACTACGAATGCTTGTGCGGCAAGTACAAGCGCATGAAGTTCAAGGGCGTCATCTGCGAAAAGTGCGGCGTCGAAGTCACTCTGAGCCGCGTTCGTCGTGAGCGCATGGGCCATATTGAGCTCGCCGCTCCGGTTGCTCACATCTGGTTCCTGAAGTCTTTGCCGAGCCGCATTGCCCTGCTGCTCGACATGACGCTCAAGGATATCGAGCGTATCCTTTACTTCGAAAACTATGTCGTTCTTGACCCAGGTCTTACCCCGTTCACACAGAACGAGCTCCTGACCGAAGAGCAGTTCCTGGACGCCCAGGACGAATACGGTGCCGACACCTTCACCGCCAAGATCGGCGCTGAAGCCATTCGCGACATCCTGCTCGGGCTCGACCTCGAAAAGATCGCCGCCGATCTGCGCGTCGAAATTGCCGAGGCCACGACTGAACTTAAGCCCAAGAAGCTCGCCAAGCGCCTGAAGATCGTCGAACAGTTCATCGTATCGGGCAACAAGCCCGAATGGATGATCATGACCGTCATTCCGGTCATTCCGCCCGAGCTGCGCCCGCTGGTGCCGCTGGATGGTGGCCGCTTTGCCACGTCCGATCTCAACGACCTCTATCGTCGCGTCATCAACCGCAACAACCGCCTGAAGCGCCTGATCGAGCTCCGCGCCCCGGACATCATCATCCGCAACGAAAAGCGCATGCTGCAGGAAGCCGTTGACGCTCTGTTCGACAACGGCCGCCGTGGCCGCACCATCACCGGTGCCAACAAGCGTCCGCTGAAGTCGCTCTCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTCGGTAAGCGCGTCGACTATTCCGGTCGTTCGGTCATCACCGTGGGTCCCTACCTCAAGCTGCACCAGTGCGGCCTGCCCAAGAAGATGGCGCTCGAGCTGTTCAAGCCGTTCATCTACTCGCGCCTCGAGGCCAAGGGCTTCTCCTCAACGGTGAAGCAGGCCAAGAAGCTGGTGGAAAAGGAAAAGCCGGAAGTCTGGGATATCCTGGACGAGGTCATCCGCGAGCACCCGGTGCTGCTGAACCGCGCCCCGACGCTGCACCGTCTGGGCATCCAGGCGTTCGAGCCGATCCTGATCGAAGGCAAGGCCATCCGCCTGCACCCGCTCGTCTGCTCGGCCTTCAATGCCGACTTCGACGGTGATCAGATGGCTGTCCACGTCCCGCTGTCGCTCGAGGCGCAGCTGGAAGCCCGCGTGCTGATGATGTCGACCAACAACATCCTGCACCCGGCCAACGGCCAGCCGATCATCGTCCCCAGCCAGGACATCGTTCTGGGTCTCTACTACCTGTCGTTGATGAGCGAAGGTGAGCCGGGTGAAGGCATGGCGTTCGCGTCCTATGCCGAGCTCGAGCACGCGCTCGACAACAAGGTCGTGACCCTGCACACCAAGATCAAGGCACGCGTGCCGGCCTGGGACAAGGACGGCAACGAGATCACCGAGATCGTGGAAACGACCCCGGGCCGTATGCTCATCGGGCAGATCCTGCCCAAGAGCCCGACGGTGCCGTTCGCAACGGCGAACCAGCTGATGACCAAGAAGATGATCTCCAAGATGATCGACACGGTTTACCGTGGCTGCGGTCAGAAGGAGACCGTGATCTTCTGCGACCGCGTCATGCAGCTCGGTTTCAAGAATGCTTGTGATGCCGGCATTTCGTTCGGCAAGGACGACATGGTTATCCCGGCGTCCAAGTACACCATTGTCGAAGACACCCGTAAGCTGGTCGAGGAATTCGAGCAGCAGTACAATGACGGCCTGATCACCCAGGGCGAAAAGTACAACAAGGTCGTCGACGCCTGGGCCAAGTGCGGTGACAAGATCGCCGAAGAAATGATGAAGGGCATCGCTGCCGTTCAGTTCGACAAGGAAACGGGTCGTCAGAAGCCGATCAACTCGGTCTATATGATGAGCCATTCCGGTGCTCGTGGTTCACCGGCACAGATGAAGCAGCTCGCCGGCATGCGCGGTCTCATGGCCAAGCCGGACGGCTCGATCATCGAAACGCCGATCACCGCGAACTTCAAGGAAGGCCTCAACGTTCTCGAGTACTTCAACTCGACCCACGGTGCCCGCAAGGGTCTGGCCGATACCGCTCTGAAGACCGCAAACTCGGGTTACCTGACCCGCCGTCTCGTTGACGTGGCGCAGGCCGCCATCATCATCGAGGTGGATTGCGGTACCGAACGCGGCCTCACCATGGAGCCGATCGTGGACGCAGGCGAGATCGTGGCCTCACTCTGTCAGCGCGTTCTCGGCCGTACGACTGCCGACGACGTGTTCCACCCCTTGACGGGTGACCTGATCGCGCCGAAGGGCACTCTGCTCGAAGAAAAGCATGTCGACGTCATCGAAGAGGCTCGCATCCAGTCGATCCGCATTCGCTCGCCGCTGACCTGCGATCTCCGCCAGGGCTGCTGCGCGGCTTGCTATGGTCGCGACCTGGCTCGTGGTACCCCGGTCAATATCGGTGAAGCTGTCGGCGTTATCGCCGCGCAGTCCATCGGTGAACCCGGCACCCAGCTCACCATGCGTACCTTCCATATCGGTGGTACCGCTCAGGTGGTCGACTCCTCGTTCCTCGAAGCTGGCGCTGAAGGCACGATCGAAGTTCGCAACCCGAACCTCGCCAATGTCGAAGGTGGCAAGCAGGTCGTCATGGCCCGTAACGTTGCTCTCGTCATCCTGGATGGCGAAGGCAAGGAACGTGCGACCCACAAGGTGACCTACGGCTCCAAGCTCCTCGTCAAGGCTGGCGACACCGTTCGTCGCGGCCAGCGTCTGGCTGAATGGGATCCGTACACCCGTCCGATCCTGGCCGAAGTCGAAGGCGAGGTCCTGTTCGAGGATCTGGTCGACGGTGCTTCGGTTGCGGAAAACACCGACGAGGCCACTGGCTTCACAAAGCGCGTGGTCATCGACTGGCGCGGCAACCAGCGTGGTGAGGGCCTCAAGCCCGCACTCGCCATTGCCCGCGGCGGTGCGGTTGCCAAGGTCGAACGTGGTGGCGATGCCCGTTACCTGCTCTCCGTCGACGCGGTTATCAACGTCGAGCCGGGCGAGAAGGTCGCTCCGGGTGATATTCTCGCTCGTATCCCGCTCGAAAGCGCCAAGACCAAGGACATCACCGGCGGTCTGCCGCGTGTGGCCGAGCTGTTCGAAGCCCGTCGTCCGAAGGATCACGCCATCATCGCCGAGATCGATGGCACCATCCGCTTCGGTCGCGACTACAAGAACAAGCGCCGTGTCATCATCGAGCCGACCGAAGAGGGTGCCGATCCGGTCGAGTACTTGATCCCGAAGGGCAAGCCGTTCCACCTCCAGGAAGGCGACACCATCGAGAAGGGCGAATACATCCTGGACGGCAATCCCGCTCCGCATGACATCCTTGCCATCAAGGGCGTTGAGGAACTGGCGCGCTACCTCGTCAACGAGATCCAGGAAGTCTATCGCCTGCAGGGCGTGTTGATTAACGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTGCAGAAGGTCGAGATCGTGGATCCAGGTGAGTCTGGCCTGCTCAAGGACGAGCAGCTCGACAAGCTGGACTTCGACGAGCTCAACGATGCTCTGGTGGCCGAAGGCAAGAAGCCGGCGACTGCCAACCCGGTGCTGCTCGGCATCACCAAGGCG
PROTEIN sequence
Length: 1308
MNHHSHVMDPFNPAVPVQTFDQMKISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRMKFKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPSRIALLLDMTLKDIERILYFENYVVLDPGLTPFTQNELLTEEQFLDAQDEYGADTFTAKIGAEAIRDILLGLDLEKIAADLRVEIAEATTELKPKKLAKRLKIVEQFIVSGNKPEWMIMTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRMLQEAVDALFDNGRRGRTITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVITVGPYLKLHQCGLPKKMALELFKPFIYSRLEAKGFSSTVKQAKKLVEKEKPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPILIEGKAIRLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSLMSEGEPGEGMAFASYAELEHALDNKVVTLHTKIKARVPAWDKDGNEITEIVETTPGRMLIGQILPKSPTVPFATANQLMTKKMISKMIDTVYRGCGQKETVIFCDRVMQLGFKNACDAGISFGKDDMVIPASKYTIVEDTRKLVEEFEQQYNDGLITQGEKYNKVVDAWAKCGDKIAEEMMKGIAAVQFDKETGRQKPINSVYMMSHSGARGSPAQMKQLAGMRGLMAKPDGSIIETPITANFKEGLNVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQAAIIIEVDCGTERGLTMEPIVDAGEIVASLCQRVLGRTTADDVFHPLTGDLIAPKGTLLEEKHVDVIEEARIQSIRIRSPLTCDLRQGCCAACYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVVDSSFLEAGAEGTIEVRNPNLANVEGGKQVVMARNVALVILDGEGKERATHKVTYGSKLLVKAGDTVRRGQRLAEWDPYTRPILAEVEGEVLFEDLVDGASVAENTDEATGFTKRVVIDWRGNQRGEGLKPALAIARGGAVAKVERGGDARYLLSVDAVINVEPGEKVAPGDILARIPLESAKTKDITGGLPRVAELFEARRPKDHAIIAEIDGTIRFGRDYKNKRRVIIEPTEEGADPVEYLIPKGKPFHLQEGDTIEKGEYILDGNPAPHDILAIKGVEELARYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEIVDPGESGLLKDEQLDKLDFDELNDALVAEGKKPATANPVLLGITKA