ggKbase home page

scnpilot_p_inoc_scaffold_1817_8

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_4_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 7858..10101

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIB7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 734.0
  • Bit_score: 998
  • Evalue 4.50e-288
  • rbh
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 734.0
  • Bit_score: 998
  • Evalue 1.30e-288
TonB-dependent receptor {ECO:0000313|EMBL:ACU63679.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 734.0
  • Bit_score: 998
  • Evalue 6.30e-288

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2244
TTGCCCGATGATCCTCTTTCTTTTACCATGAAAATCTACATATTGATATGCTCAGCGTTTTTTTGTTCTGTAAGCGTGTCAGCGCAAACGGCAAAAGGACGTGTAATAGATGAATTATCGAAACCCCTGGAAGGCGCTTATATAGCAAACCTTCGTTCAGGCACGCATGCACACGTGGATGAGACCGGTTTTTTCATCATTGCCAATACTGCTCCCGGCGACAGTATCATTGTCAGTCATATTGGTTACCAAAGCAGGATACTACGATATGAGGACAGTAGTTTTAATCCTGTAAAACTATTTCTTTCGCCATTTGAGCTGAGCGAAGTCGTCATTAATTCCGGCATAAGGCATTTGAATATCATTTCTTCCATTGACCTGAATACGTCGCCTGTTAATTCATCGCAGGAGCTTTTACGGAAAGTGCCGGGCTTGTTTATTGGTCAGCATGCAGGTGGAGGGAAGGCGGAACAAATCTTCCTGCGTGGTTTTGATTGTGATCACGGCACCGATATTAACATATCTGTAGATGGTATGCCGGTAAATATGGTAAGTCATGCTCACGGGCAGGGATATGCTGACCTTCATTTTCTGATCCCTGAAACAGTAGATAAAATTGACTTTGACAAAGGACCCTATTTTGCCGACAAAGGCAATCTGGCTACGGCGGGATATGTGGCTTTTAAAACCAAAGAAAGACTGGAGAGCAGCTCTGTTTCACTGGAAGCGGGGCGTTTTAACACATTCAGGGTTTTGGGTCTCCTGGATGTACTGAATACTGATCATCAATCGGCCTACATTGCATCGGAGCTGTATATGACGAATGGTCCGTTTATAGCCCCGCAAAATTTTAAGCGCATCAACCTGATGGGTAAATATACTGCCTGGCTGACCAATAATGATAAGCTTTCATTTAGCCTCTCACATTTCGCCGGCAAATGGAATGCAAGCGGGCAGATACCACAACGTGCAGTTGACGAAGGATTGATCACCCGTTTTGGTTCAATAGATAGTACAGAAGGCGGCCATACTTCAAGAACCAATGTGAACCTGCAATATATTCATCATGTTAATCCCTATACTTTTATAAAGAATACCGCTTATTACAGCCACTACAATTTTGAGCTGTATTCTAATTTCACTTTCTGGCTGAACGATCCTGTTAACGGCGACCAGATCAGGCAAAAGGAAGGCCGTAATACGACAGGCTTTGAAACTGAGCTGAACAAGTCCCTGCTCATCGGCAATGCGACAGTTACAATGCAGGCTGCTGCCGGGTTCCGCTCAGATGCAGTGCATAATATAGAATTATCGCATACGGTTGACCGTAAGACAACATTGCAAAATATAATGCTGGGCGATATTGATGAGACAAATATATACAGTTATATCAATACGGAGTTCAGGACTGGTAAATGGCTGATCAACCCGGCTATACGGTTTGATCATCTTCAGTTTAATTATGAAGACCGGTTGGCTGCAGGCTTCAGTACGCAATCGCAATCTACATCTATTATAAGCCCCAAGCTGAATTTCCTGTATGCTCAAAGTAAGGATCTTCAATATTTTATCAAGCTGGGTAAAGGCTTTCACAGTAATGATACGCGGGTAGTCGTTGCACAATCGGGCAGGCAGATCCTTCCTGCTGCTTATGGCGCTGATATCGGGTTGATATGGAAGCCCCTGCCAAGAGTGGTGGTAAATACAGCGCTTTGGTATTTATATCTTCAACAGGAATTTGTATATGTGGGGGATGAAGGGGTAGTTGAGCCCGGCGGAAGAACAGCAAGGAAAGGTATAGATATTGGATTACGCTGGCAGTTGAACAACTGGCTGTTTTTTAATGGTGATCTTACATATACCCACGGCAGAAGTCTCGACGATCCCAAAGGAGAGAACTATATTCCTCTCGCTCCCATCACCACATTTACCGGTGGTTTTAGCGTAAAAGACAAATCAGGATTTTCCGGAAGCATAAAAAGCAGGTGTATAGGCGACAGACCTGCAAATGAAGATAACAGCATCGCCGCGAAAGGATATTTTGTTACCGATATGAATATAAATTATCAATGGCACAATATCCGTTTTGGTATCATCACTGAAAATATATTCAATGCCCGGTGGAATGAAACACAGTTCGCAACTACTTCCCGTTTGTATAATGAACCTCAGGCAGTAACGGAAATTCATTTTACTCCCGGAACACCTTTTAATATCAGGGCTGCTGTCACTTTTTCGTTTTAG
PROTEIN sequence
Length: 748
LPDDPLSFTMKIYILICSAFFCSVSVSAQTAKGRVIDELSKPLEGAYIANLRSGTHAHVDETGFFIIANTAPGDSIIVSHIGYQSRILRYEDSSFNPVKLFLSPFELSEVVINSGIRHLNIISSIDLNTSPVNSSQELLRKVPGLFIGQHAGGGKAEQIFLRGFDCDHGTDINISVDGMPVNMVSHAHGQGYADLHFLIPETVDKIDFDKGPYFADKGNLATAGYVAFKTKERLESSSVSLEAGRFNTFRVLGLLDVLNTDHQSAYIASELYMTNGPFIAPQNFKRINLMGKYTAWLTNNDKLSFSLSHFAGKWNASGQIPQRAVDEGLITRFGSIDSTEGGHTSRTNVNLQYIHHVNPYTFIKNTAYYSHYNFELYSNFTFWLNDPVNGDQIRQKEGRNTTGFETELNKSLLIGNATVTMQAAAGFRSDAVHNIELSHTVDRKTTLQNIMLGDIDETNIYSYINTEFRTGKWLINPAIRFDHLQFNYEDRLAAGFSTQSQSTSIISPKLNFLYAQSKDLQYFIKLGKGFHSNDTRVVVAQSGRQILPAAYGADIGLIWKPLPRVVVNTALWYLYLQQEFVYVGDEGVVEPGGRTARKGIDIGLRWQLNNWLFFNGDLTYTHGRSLDDPKGENYIPLAPITTFTGGFSVKDKSGFSGSIKSRCIGDRPANEDNSIAAKGYFVTDMNINYQWHNIRFGIITENIFNARWNETQFATTSRLYNEPQAVTEIHFTPGTPFNIRAAVTFSF*