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scnpilot_p_inoc_scaffold_2007_5

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_4_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 5039..6265

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R4_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 416.0
  • Bit_score: 287
  • Evalue 2.80e-74
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 416.0
  • Bit_score: 287
  • Evalue 7.80e-75
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW03358.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 416.0
  • Bit_score: 287
  • Evalue 3.90e-74

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1227
ATGATTGATCTCAAAATTATCAGGGAGTTACTGGATCGCTATAGTGCAGGAACAGCCTTACCCCATGAGCAGGAGTTGATAGAACGCTGGTTGCGGGAAAATGAGCTTCCGGACAATGAATGGGCGCGACTGGATCCGGAGAACCGCGAGCATTGGATAAAAGAGATGGGGGAAGAGCTTTTGAAGCATGCCAGTGAAAGAACCGGATCGCCGGATGCTACAATAAGGCAGGGACTTCCCTGGCACCGGAGGTTTTATTTTCATCTTGCCGCGGCATCGGTAATTATGCTGATTGCAACAGGCAGTTGGTACTTTATGAGGGGAATGCGGAAGGATATACCGGTTGCAAAAAAAACTGAAGAGGTTATTAAGAATGACGTAGCTCCGGGTAGTAATAAGGCCGTGTTGACATTGGCGGACGGGGGAACAGTAGTGCTGGATGATGCTAATAACGGAGTGCTGACCAGCCAGGGAAGCACCGAAGTACGTAAACGGGGCAATGAGCTTGTATATAGCCAGGAGCAGAACAGCAGCGCTATCCATATACCTGTTTTCAATACACTCACCACGCCACGGGGCGGGCAATACAACCTGGTGCTTCCTGATGGTAGTCACGTATGGCTCAATGCGGCATCTACCGTCAAATATCCGGTTGCATTTGTCGGCGACAGCAGGATAGTAGAGGTAAAGGGTGAAGTGTATTTTGAAGTGGCGTCTTTTATCCGTTCGGGTAAAAAAGTTCCATTCAGGGTGAAAGTGCTGTCAGAGAAGAATGAGCAGAAAAGCCTGATTGAAGTGATGGGCACGCATTTTAATATCAATGCATACGATGAGGAAGCGAGCGTGAATACCACTCTGCTCGAGGGTAAAGTAAAAGTAAGTTCCGGCATGGAAAGTCATACAGACTTTGCAGTACTGAAGCCTGGTCAGCAGGCGCAGGTCAGCAACAGGGACGGGGCGATTAAGATCGTAAAGGATGCCGACATTGATGAGGCTGTAGCCTGGAAGAACGGTTTGTTCATGATGAGCGGAGCTGATATATCAGTGGTGCTCAGAAAGCTGGCAAGATGGTATAATGTGGATATCATTTATGAAAAAGGGATGCCGAAAGGTAAGATCACGGGCGACATACCACGTAATATGCTGCTGTCTGAAGTATTAAAAGTAATGAAGCTCAGTGGTATACAATGCAGGATAGAAGGAAAGAAATTAATTGTAGGATCATAA
PROTEIN sequence
Length: 409
MIDLKIIRELLDRYSAGTALPHEQELIERWLRENELPDNEWARLDPENREHWIKEMGEELLKHASERTGSPDATIRQGLPWHRRFYFHLAAASVIMLIATGSWYFMRGMRKDIPVAKKTEEVIKNDVAPGSNKAVLTLADGGTVVLDDANNGVLTSQGSTEVRKRGNELVYSQEQNSSAIHIPVFNTLTTPRGGQYNLVLPDGSHVWLNAASTVKYPVAFVGDSRIVEVKGEVYFEVASFIRSGKKVPFRVKVLSEKNEQKSLIEVMGTHFNINAYDEEASVNTTLLEGKVKVSSGMESHTDFAVLKPGQQAQVSNRDGAIKIVKDADIDEAVAWKNGLFMMSGADISVVLRKLARWYNVDIIYEKGMPKGKITGDIPRNMLLSEVLKVMKLSGIQCRIEGKKLIVGS*