ggKbase home page

scnpilot_p_inoc_scaffold_3885_3

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_4_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(988..1902)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Flavobacterium sp. CF136 RepID=J2JX70_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 304.0
  • Bit_score: 453
  • Evalue 1.30e-124
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:KIC94629.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibac similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 304.0
  • Bit_score: 490
  • Evalue 1.70e-135
transcriptional regulator domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 304.0
  • Bit_score: 430
  • Evalue 3.30e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 915
ATGCTTGTTAGAAGAAATCTCCTGTACGGGAAACGTAAATACCTGTACGGATTATTAATATTCATGTTTATCTCTTTAATCTGTGTGGCTTTCAGTATAACGGGCAGTGATGACTTTGATATCGCCAGGAGGGAAGTTTTGCTTCGCCGGATCGGACATGAAATACTTCTTCAGTCGGGCGACAGTGTATCCCGGGTACTCCCGGTAAAAAAGATCGCCGAAAATGAATACCAGATCAGTTTTGAGAACGCTTTTACTTTTCAACCAGACTCACTGGTGAATACTACCCAGCGTTTGTTAGCCAGAGACCCGCTGACAAGTGATTATGTTGTTAACGTGCTTAACTGTGCCAATGCCACTGTAGCTTATGGATATGCTATATCAAAAAATAAGAAAGATGATATTGTAGCCTGTAAAGGAAGAAGGCAACCCGTAGCATGTTATATGATCAACATTAAATTTAAACCATCGGGGATAGCTACAGCAAAGAATGAATATTTTTTGGGCGCTCTGCTGTTTTTAGCATTTGGCGGATTTATTTTTTTTAGATCTGTCAAGCCGCGGAAGACCTTACCAGAAAGTCAGGATACAGAATTACCTGTCAGCCGGAACATTGGTATATTCACTTTGGGGTCAATGTCGTTCGATGCGGAGGCCCGTAAGCTCATGGTAAATGGAAAGACCATAGACCTGACCAGAACTGAAACCCGTGTACTACGCATTTTCGCGTTGTCTCCTAATGAGGCTATAGAGCGAAGCCGGCTGCAAAAAGAGATATGGGAAGATGAAGGTGTTATAGTCGGTCGCAGTCTCGACATGTTCATATCAAAACTTAGAAAAAAACTGGAAGTTGATCCGAACATCAGGATTGTTGTTATACGCGGCAAAGGGTATAAGCTTGAAATTAGCGCTTAA
PROTEIN sequence
Length: 305
MLVRRNLLYGKRKYLYGLLIFMFISLICVAFSITGSDDFDIARREVLLRRIGHEILLQSGDSVSRVLPVKKIAENEYQISFENAFTFQPDSLVNTTQRLLARDPLTSDYVVNVLNCANATVAYGYAISKNKKDDIVACKGRRQPVACYMINIKFKPSGIATAKNEYFLGALLFLAFGGFIFFRSVKPRKTLPESQDTELPVSRNIGIFTLGSMSFDAEARKLMVNGKTIDLTRTETRVLRIFALSPNEAIERSRLQKEIWEDEGVIVGRSLDMFISKLRKKLEVDPNIRIVVIRGKGYKLEISA*