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scnpilot_p_inoc_scaffold_5991_6

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_4_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 4420..5112

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E2_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 228.0
  • Bit_score: 393
  • Evalue 1.20e-106
  • rbh
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 230.0
  • Bit_score: 394
  • Evalue 7.50e-107
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 228.0
  • Bit_score: 393
  • Evalue 3.40e-107

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCAATCAGTAAAAAAAGAAAAAATTCGGAAGCTAAAATAGACAAGAGTAAAACATATTCGCTTAAGGAAGCTTCCTCCCTTGTAAAAGAAGTGAATACCACTAAATTCGACAGCTCTGTTGACATACACCTGCGTCTCGGCGTTGACCCTAAAAAGGCTGACCAGGCCATACGCGGAACCGTTACTTTACCGCACGGTACAGGTAAAACCAAAAGAGTACTGGTACTCTGCACCCCCGATAAGGAAGAAGCTGCAAAAGCTGCAGGCGCCGACTATGTAGGACTTGATGAGTTCGTTACCAAAATTGAAGGCGGCTGGGTAGATGTAGATGTTATTGTGGCCACACCCGCAGTGATGCCTAAGATTGGTAAGCTTGGTAAAATACTTGGTCCCCGCAACCTGATGCCCAACCCCAAAACCGGCACCGTTACCAATGACGTGGCTGCTGCAGTAAACGAGGTAAAAGGAGGCAAGATCGCATTTAAAGTGGATAAAGCAGGTATCATCCATGCTTCTGTAGGACGGGTAAGTTTTTCACCTGAAAAAATTGCCGAGAACAGCCAGGAGTTTATCAATGCTATTATTAAAGCAAAGCCGTCTACTGCCAAAGGCACTTACCTGAAGAGCGCATTTATGGCAAGCACCATGAGCCCCGGCATTGCTATTGATACCAAATCATTAATGAACTAA
PROTEIN sequence
Length: 231
MAISKKRKNSEAKIDKSKTYSLKEASSLVKEVNTTKFDSSVDIHLRLGVDPKKADQAIRGTVTLPHGTGKTKRVLVLCTPDKEEAAKAAGADYVGLDEFVTKIEGGWVDVDVIVATPAVMPKIGKLGKILGPRNLMPNPKTGTVTNDVAAAVNEVKGGKIAFKVDKAGIIHASVGRVSFSPEKIAENSQEFINAIIKAKPSTAKGTYLKSAFMASTMSPGIAIDTKSLMN*