ggKbase home page

scnpilot_p_inoc_scaffold_875

Search features with annotation key words

Displaying items 31-56 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_875_31
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(33057..33725)
DNA (669bp) protein (223aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U6S2_DEIML
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADV66761.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="De
scnpilot_p_inoc_scaffold_875_32
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33704..34573)
DNA (870bp) protein (290aa)
ABC-type metal ion transport system, ATPase component n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PMX7_9FIRM
ABC-type metal ion transport system, ATPase component {ECO:0000313|EMBL:EKP94257.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; T
ABC transporter
scnpilot_p_inoc_scaffold_875_33
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(34570..35196)
DNA (627bp) protein (209aa)
Putative membrane protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZIA4_TERRK
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFL88972.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391
scnpilot_p_inoc_scaffold_875_34
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35814..37013)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U5U1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK90323.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
lipoprotein
scnpilot_p_inoc_scaffold_875_35
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37079..37666
DNA (588bp) protein (196aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NM49_ROSCS
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
scnpilot_p_inoc_scaffold_875_36
Thermus sp. CCB_US3_UF1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

37670..38800
DNA (1131bp) protein (377aa)
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=1 Tax=Thermus sp. CCB_US3_UF1 RepID=G8NBC8_9DEIN rbh
Phosphoribosylaminoimidazole carboxylase ATPase subunit
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
scnpilot_p_inoc_scaffold_875_37
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38965..40128)
DNA (1164bp) protein (388aa)
General secretion pathway protein E n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F277_SORC5 rbh
gspE1; general secretion pathway protein E
General secretion pathway protein E {ECO:0000313|EMBL:CAN94459.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="
scnpilot_p_inoc_scaffold_875_38

Not on your lists

40309..41973
DNA (1665bp) protein (555aa)
Putative lipoprotein-like protein n=1 Tax=Adineta vaga RepID=B3G4R1_ADIVA
Marine sediment metagenome DNA, contig: S03H2_L05169 {ECO:0000313|EMBL:GAH46058.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
scnpilot_p_inoc_scaffold_875_39

Not on your lists

comp(42004..42807)
DNA (804bp) protein (268aa)
Uncharacterized protein family UPF0066 domain protein n=1 Tax=uncultured microorganism RepID=F8UI88_9ZZZZ
Uncharacterized protein family UPF0066 domain protein {ECO:0000313|EMBL:AEI30745.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
scnpilot_p_inoc_scaffold_875_40
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43052..43426
DNA (375bp) protein (125aa)
glycoside hydrolase n=1 Tax=Streptomyces RepID=UPI000380E4E2
Glycoside hydrolase {ECO:0000313|EMBL:KJK48358.1}; TaxID=1609137 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
NLP/P60 protein
scnpilot_p_inoc_scaffold_875_41
unknown

Not on your lists

comp(43358..43540)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_875_42
unknown

Not on your lists

43550..44929
DNA (1380bp) protein (460aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_875_43
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(45046..45339)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B282_HERA2
Uncharacterized protein {ECO:0000313|EMBL:CDM66432.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
scnpilot_p_inoc_scaffold_875_44
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45666..46325)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FP21_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92015.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_p_inoc_scaffold_875_45
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46683..47861
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6E035_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EYF05907.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_875_46
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47865..48785)
DNA (921bp) protein (307aa)
endA1; protein EndA1 (EC:3.1.21.1); K01150 deoxyribonuclease I [EC:3.1.21.1] Tax=RifOxyA12_full_Proteobacteria_58_15_curated
endA1; protein EndA1 (EC:3.1.21.1)
endonuclease I n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI000375AE81
scnpilot_p_inoc_scaffold_875_47
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48964..49974
DNA (1011bp) protein (337aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FV29_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF03123.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_p_inoc_scaffold_875_48
unknown

Not on your lists

50374..50622
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_875_49
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(50636..51766)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7G8_9GAMM
Sterol desaturase {ECO:0000313|EMBL:KIA95763.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensi
hypothetical protein
scnpilot_p_inoc_scaffold_875_50
unknown

Not on your lists

comp(52026..52796)
DNA (771bp) protein (257aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_875_51
unknown

Not on your lists

52846..53163
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_875_52
unknown

Not on your lists

comp(53253..54545)
DNA (1293bp) protein (431aa)
peptidase
scnpilot_p_inoc_scaffold_875_53
unknown

Not on your lists

comp(54649..54912)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_875_54
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54973..55440
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q397X0_BURS3
Ketosteroid isomerase-related protein {ECO:0000313|EMBL:EYF01133.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" so
hypothetical protein
scnpilot_p_inoc_scaffold_875_55
unknown

Not on your lists

55604..56779
DNA (1176bp) protein (392aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_875_56
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56837..57391
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQR3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35522.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
Displaying items 31-56 of 56 in total

View Taxonomy