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scnpilot_p_inoc_scaffold_259_33

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 36798..37148

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding region RNP-1 (RNA recognition motif) n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYW0_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 120.0
  • Bit_score: 129
  • Evalue 2.80e-27
RNA recognition motif-containing protein similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 120.0
  • Bit_score: 129
  • Evalue 7.80e-28
RNA-binding region RNP-1 (RNA recognition motif) {ECO:0000313|EMBL:CAN97579.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangiu similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 120.0
  • Bit_score: 129
  • Evalue 3.90e-27

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGGGCAATCGTCTTTATGTGGGAAACCTGTCGTACGAGTCCACGGCTGAAGGGCTCCGGCAGACCTTCTCCGAGTTCGGAGAGGTCACCGACGCCCACGTCGTGATGGACCGCGAGAGCGGCCGTTCGCGAGGCTTCGGCTTCGTCACCATGGGCACCGCGCAGGACGCGCAGAACGCCATGGAGAAGATGAACGGCGCGATGTTCGACGGCCGTCCGCTCAAGGTCAACGAGGCCGAGGAGCGTCCGAACCGCGGCGGTGGCGGCGGCGGCGGTGGCCGCGGTGGCTTCGGCGGTGGTGGCGGCGGCGGCGGTGGTGGACCGCGTCGCGGCGGTCACCGCGGCTGGTAG
PROTEIN sequence
Length: 117
MGNRLYVGNLSYESTAEGLRQTFSEFGEVTDAHVVMDRESGRSRGFGFVTMGTAQDAQNAMEKMNGAMFDGRPLKVNEAEERPNRGGGGGGGGRGGFGGGGGGGGGGPRRGGHRGW*