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scnpilot_p_inoc_scaffold_542_47

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 53238..54467

Top 3 Functional Annotations

Value Algorithm Source
Vegetative cell wall protein gp1 n=2 Tax=Chlamydomonas reinhardtii RepID=GP1_CHLRE similarity UNIREF
DB: UNIREF100
  • Identity: 30.2
  • Coverage: 328.0
  • Bit_score: 114
  • Evalue 3.20e-22
Vegetative cell wall protein gp1; Hydroxyproline-rich glycoprotein 1; Flags: Precursor;; TaxID=3055 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 30.2
  • Coverage: 328.0
  • Bit_score: 114
  • Evalue 4.50e-22
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 28.3
  • Coverage: 350.0
  • Bit_score: 101
  • Evalue 8.90e-19

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Taxonomy

Chlamydomonas reinhardtii → Chlamydomonas → Chlamydomonadales → Chlorophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1230
ATGGCGAATTGCACGAAGTGCAGCGCTGACCTGACGACCACTGCGGGTGGTTCGAGCCCCAAATTTTGCGCAGCCTGCGGCTCGCCTGTCGTCCAGCAAGCAACCAGCGAGCAGGGGCCGAGCACGCTCGGCGGACTGTCGGCCACGACGCACTCCAATCCGAGCGTCACCACCTCGCCGAGCGGCGGGCCGGTATCGCACGTGAACCCGTTCGCGGCGACGGCATCACCGACGTCTCGGGCCATCGAGCCCGCGCCCCCTGCGCCCGCGTTGTCACCTGCCGAGAACGGCGAAGCACCGCAACCCGCGCAACCTCTCGCGCCGGCCGCCGAGGCGAAGGAGGCACCGGCCTTCCGCCCGTCGACGCCACCGCCGGGCACCGAAGGCTCGCCGGTCTCCCCCCTCGCGGTGAGCAGCGCGCACTCCGAGCGCGGAGCGTTCCAGCAGGCAATGGAACAGGTGATGGACAAGGCGCGCTCGTCGGTGACGCCGCCGGCACCTCCAGCGCGCCCGCACAAGGCCGGCACGCAGGTCATGCCGAGCGCGCCCGGTCGACCGCTTCCCACGCCCGCACCGCAAGAGGCTGCGGCGTCGCCGAAGAAGGCTCCTCCGCGGACCGTCGCGATGAGCTTCGGCGGCGCGCTGCCGGGCGGCGCTGCTCCGAACACGACACCGGGCGGCGTCGCGAGCAGCCCACCTCAAGGCATCGGCGTCCCCGCACAGCCGCCGAGCGTCGTGCAGCCGAGCGTGGCTCCCCCAGGCAATCCGGTGATGCCGCATGGCGCGATGGCACCGACCAACGCTCCACACCAGATGCCCCCGGGCGCGATCCAACCGGCCGGACCTCATCCGGGCGTCGCCCAGCCGGGCGGGTTCCAGCCACATCCGCAGGGCGCGCTCCATGCGCAGCCGCAGCCACAGAGCGCGATGGGACAGCCACCGATGGCGCACCCCGGAGCTCCCTACAACGCGGCGCCTCCTTACCCGCAGCAACCACCGGCGCCGGTGGGGCCGGGTGGATGGGGGTGGCATGCGGGGATGCCGGCCGCGCAGCCCCCGATGGTCCAGTACCCGTTCGGGTACGCGCCCGGATCGCGCGTACAGGTCACCTGGTCGAACGGACAGCGCTACCCGGCGACCGTGAGCCAGGTGAGCGGCACGCAGTGCCTCGTCGTCTTCCCGGACGGCCAGCAACACTGGGTCGAGATGCAATACCTCTCCCCGAGCTAA
PROTEIN sequence
Length: 410
MANCTKCSADLTTTAGGSSPKFCAACGSPVVQQATSEQGPSTLGGLSATTHSNPSVTTSPSGGPVSHVNPFAATASPTSRAIEPAPPAPALSPAENGEAPQPAQPLAPAAEAKEAPAFRPSTPPPGTEGSPVSPLAVSSAHSERGAFQQAMEQVMDKARSSVTPPAPPARPHKAGTQVMPSAPGRPLPTPAPQEAAASPKKAPPRTVAMSFGGALPGGAAPNTTPGGVASSPPQGIGVPAQPPSVVQPSVAPPGNPVMPHGAMAPTNAPHQMPPGAIQPAGPHPGVAQPGGFQPHPQGALHAQPQPQSAMGQPPMAHPGAPYNAAPPYPQQPPAPVGPGGWGWHAGMPAAQPPMVQYPFGYAPGSRVQVTWSNGQRYPATVSQVSGTQCLVVFPDGQQHWVEMQYLSPS*