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scnpilot_p_inoc_scaffold_512_36

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 38142..39467

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000374241F similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 485.0
  • Bit_score: 389
  • Evalue 5.60e-105
RNA polymerase sigma factor rpoD (Sigma-80) {ECO:0000313|EMBL:CBI08636.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 487.0
  • Bit_score: 380
  • Evalue 2.80e-102
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 483.0
  • Bit_score: 377
  • Evalue 4.80e-102

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 1326
TTGAAGAAGTCCGAAGCCCCCAACCTCTCCAAAGCGCCCCTTGCGACCACGTCGCCGCCGGCAGTAGCCGAAGAAGCGGTCGACATGTACTTCCGCAAGATGGCCCAGGTGTCACTCTTGACCCGCGAGGGCGAGGTGATGCTCGCCCAGAGGATCGAGGAGGGCGAACGGAGGATCATCGAGGCGATCGTGGAGTCGCCGTTCGCGGCTGCCGAGCTCGACCATATCGGGCGGCTCCTCTACAAGGGCCGGCTCAAGGTCCGAGACGTCGTTCGCAACGTCGACGACGAAGACGCCTTCGACGAGGGCACGATGCTCAAGATCGCGCGCCTCCTCGAGCGTCCGCTCAAGGAGCTTCACGGGCCGAAGGTGAGGAAGCCCGAGCCCAAGGCGAAGCCGCGGGCGAACGCGAAGAAGACGAAGTACGAGCTCTCGCGCGACGACATCGTCTCCGTGCTCGAGGAGATGCGTCTCGATCGCGGCGTCATCGAGCGCATCGAAAAGAAGCTGCGCATCGTCCAGCGCGAGATGCCCGCCGCAAAGAAGGCGACGGGCGCGACCCTGGAGACGATCTCGCGTGCCCGCCGCGTGGCCGACCGCGCGAAGGCCGAGCTGGTCGAAGCGAACCTGCGCCTCGTCGTCTCGCTCGCGAAGAAGCACGTCAACCGCGGCCTCCAGCTGCTCGACCTGATCCAGGAGGGCAACATCGGCCTCATGCGCGCAGTCGACAAGTTCGACTACAAGCGCGGCTACAAGTTCTCGACGTACGCGACGTGGTGGGTCCGCCAGTCGATCTCCCGCGCGATCGCCGACCAGGGCCGCACGATCCGCGTGCCCGTGCACATGTACGAGTCGCTCCAGAAGCTGACGCGCATGAGCCGCTCGCTCCTCCAGGAGTACGGCCGCGAGCCCACCCCCGAGGAGCTCTCCGAGTCGACGGGCATCCCGGTCGAGAAGGTCCGCGCCGTGATGAAGATCGCGCGCGAGCCGATCAGCCTCGAGACGCCGGTCGGCAACGACGGCGAGTCGCACGTCGGCGAGTTCATCCCCGACGACTCCGCGATGCCGCCGGACGAGGCCTACGCGCAGATGCGCTTCAACGACCAGACGCGCCAGCTGCTCAAGACGCTCACGCCGCGAGAGGAGAAGATCCTCCGTATGCGCTTCGGCATCGACGAGCCGCGCGATCACACGCTCGAAGAGGTCGGTGAGAGCTTCTCGCTCACGCGCGAGCGCATTCGCCAGATCGAGACCAAGGCGCTCCGCAAGCTCCGCCTCCCCTCTCAGCACCGCAAGCTGAAGACGTACATCGGCGGCGGCGGCTGA
PROTEIN sequence
Length: 442
LKKSEAPNLSKAPLATTSPPAVAEEAVDMYFRKMAQVSLLTREGEVMLAQRIEEGERRIIEAIVESPFAAAELDHIGRLLYKGRLKVRDVVRNVDDEDAFDEGTMLKIARLLERPLKELHGPKVRKPEPKAKPRANAKKTKYELSRDDIVSVLEEMRLDRGVIERIEKKLRIVQREMPAAKKATGATLETISRARRVADRAKAELVEANLRLVVSLAKKHVNRGLQLLDLIQEGNIGLMRAVDKFDYKRGYKFSTYATWWVRQSISRAIADQGRTIRVPVHMYESLQKLTRMSRSLLQEYGREPTPEELSESTGIPVEKVRAVMKIAREPISLETPVGNDGESHVGEFIPDDSAMPPDEAYAQMRFNDQTRQLLKTLTPREEKILRMRFGIDEPRDHTLEEVGESFSLTRERIRQIETKALRKLRLPSQHRKLKTYIGGGG*