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scnpilot_p_inoc_scaffold_577_8

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(8270..8863)

Top 3 Functional Annotations

Value Algorithm Source
ECF family RNA polymerase sigma factor n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHJ5_MYXSD similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 196.0
  • Bit_score: 163
  • Evalue 2.90e-37
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AKF04610.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaraci similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 179.0
  • Bit_score: 177
  • Evalue 2.10e-41
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 196.0
  • Bit_score: 163
  • Evalue 8.20e-38

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Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAACGTGGGCAACGTTGCCTTGACGTCACCGACTCGGATCGAGCTCGCGTCCGCCGAGCGGCCGCAGGGGCGGATCGAAGCGGCGGCGCGCGGCGATCGTGCGGCGGCCCAGGAGCTCGCCCTGGAGCTGCTGCCCAGGGTTCGCAACCTCGTCCGTTACCTCACGCGAAGCAGCGACATCGACGACGTCACTCAAGAGGCGCTCGTCACCGTCCTCCACAGTCTTCCGAGCTATCGCCCGACGGGCTCGTTCCAGGCGTGGGTCGATCGCGTCGTCGTTCGCGCGACGTTCGCCCAGCTTCGCCGGCAGCGGCGCCGTGCCCGGCACGAGTCCCCTCAGGTCGAAGAAGACGTGGCGGCGCCCCACGACGTCGCCGGCGCCTACGCGACGCGCACACGCATCGCTGCTGCCCTCGACGCGCTGCCGGTCGAGCAGAGGTTCACCGTCGTTCTCCACCACGTGCTCGGCATGAGCGCCGCCGAGGTCGCCGAAGAGATGGACGTGCCGCTCGAGACGGCCCGAAGCCGCCTGCGTCTGGGAATGCAGCATCTGCGTCGCCAGATGGACGCGAAAGAGGGAGACTCGCGATGA
PROTEIN sequence
Length: 198
MNVGNVALTSPTRIELASAERPQGRIEAAARGDRAAAQELALELLPRVRNLVRYLTRSSDIDDVTQEALVTVLHSLPSYRPTGSFQAWVDRVVVRATFAQLRRQRRRARHESPQVEEDVAAPHDVAGAYATRTRIAAALDALPVEQRFTVVLHHVLGMSAAEVAEEMDVPLETARSRLRLGMQHLRRQMDAKEGDSR*