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scnpilot_p_inoc_scaffold_578_15

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 20553..21410

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein with HTH domain n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B3M4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 246.0
  • Bit_score: 184
  • Evalue 1.80e-43
DNA-binding protein with HTH domain {ECO:0000313|EMBL:EIQ01866.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 246.0
  • Bit_score: 184
  • Evalue 2.50e-43
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 246.0
  • Bit_score: 182
  • Evalue 1.50e-43

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Taxonomy

Opitutaceae bacterium TAV1 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 858
GTGCTCGTGCTGCGGAAATCACGCCGCGCGCCCGAGCAAGACGCCGCGCTCGCGGACTTCTACGCGCCGGGGCTGACGGCAAACTCGTTCGTGGATCGCGCCTTTTCCCTGATCTCGCGCCTCGTTCCCGGTGCACTGAACAGCCACGGAATCATCGACGCGGAGACAGGCGTTCTCAGCGCCAACTTCGACTGCGCGCCGCCCGGCCTCGCGGATGCCTTCGAGGCGTTCGGCCGGCACATGGCCAAGTATGCGCCGTTCCGGTTCGACCCTGCGGTCAACGGCGGCAAGCCCTTCAGCGCGCGTGACTTCTACAGCGGCCCCGCCTTTCGTGACCTCGACATCTACCAGGAGGTCTATCGGCCGATGCGCCTCGTCGATCACTGTTTCGTGCACGTGCCCGCGGGCCCCGGCGCGACCGTGTTCGTCGGGCTCCTCCGCGACAGCCGGCCGTTCACTCCCATGGAGAAGGAGCTACTCACGCTCGTCCAACCACACCTGGCGCACGGACGCAGAATGGCGTTCGCGATCACGGCCGCCGGCGCGATCGTATCGCCGGACCTGTTCGCCGGCGCGGGCTTCACGCCCCGCGAGAGCGACGTGCTCTACTGGCTCACGCAGGGCAAGTCGAACGACGAGATCGCGAAGATCCTCCGGCTGCGCGCAGACTCGGTGAGCCGGCACCTGCAGAACATCTACGACAAGCTCGGCGTCGAGCACCGTGTAGCGGCAACGATCCACGCGCTCGATCTCGCGCGGAAGCTCCACGCCGAAGCGCGCGCCCGGCAAGGCGGCGTCATGCTCACGATCTCCACGCGGCGAGCAGGCGCAGATGGTGACCGTCGGCCACGCCGCTGA
PROTEIN sequence
Length: 286
VLVLRKSRRAPEQDAALADFYAPGLTANSFVDRAFSLISRLVPGALNSHGIIDAETGVLSANFDCAPPGLADAFEAFGRHMAKYAPFRFDPAVNGGKPFSARDFYSGPAFRDLDIYQEVYRPMRLVDHCFVHVPAGPGATVFVGLLRDSRPFTPMEKELLTLVQPHLAHGRRMAFAITAAGAIVSPDLFAGAGFTPRESDVLYWLTQGKSNDEIAKILRLRADSVSRHLQNIYDKLGVEHRVAATIHALDLARKLHAEARARQGGVMLTISTRRAGADGDRRPRR*