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scnpilot_p_inoc_scaffold_582_29

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(29732..30367)

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYE7_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 210.0
  • Bit_score: 156
  • Evalue 2.90e-35
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 200.0
  • Bit_score: 155
  • Evalue 1.80e-35
Uncharacterized protein {ECO:0000313|EMBL:AGP41999.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 200.0
  • Bit_score: 155
  • Evalue 9.20e-35

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
GTGCTGAACCCGTCGGCCGCTTCCGCGGCTGCTGCCAACCTGGTCGGGCGCGACGACGCAGAGAGTGATCCGGCGTTGCCTGCCCAGAGACCGACCGCGAGCGAGCTGGAGCGTGCCGAGCACCTTCGCGGGCTCGTACGGGAGCACTTCTCGAGCGTGTGGCGGTTCCTTCGACGGCTCGGCTTCGAAGAGCACCTCGTCGACGACGCCGCGCAAGAGCTCTTCTTCGTCGCGCTCCGCCGCGCCGACGACATGACGCCGGGGCGCGAGCGCGCGTTCCTCTTCGGAGCCGCGCTTCGAATCGCGACCAAGATGAAACGCAAGGGCGCGCGCGAAGTGCCGGTGGACCGGCTCGCCGAGCGCGCCGAGCCGTCGGACCGTGCGGCGACGCCGGAGAAGCTCCTCGACGAGGAGCGGGCGCGCGCTCTCCTCTACCAACTGCTGTCCGAGCTCGAGGAGCGCCTTCGCGTCGTGTTCGTCATGTTCGAGCTCGAAGGAATGACCATGCCGGAAATTGCCGAGGTGATCGACATCCCCGTGGGGACGGTGGCCTCCCGTCTTCGCCATGCACGCGAAGACTTCCGCGCGCGGCTCGAGCGGCACCGCGCGCGCACGCGGCGCGAGGTAGGCACATGA
PROTEIN sequence
Length: 212
VLNPSAASAAAANLVGRDDAESDPALPAQRPTASELERAEHLRGLVREHFSSVWRFLRRLGFEEHLVDDAAQELFFVALRRADDMTPGRERAFLFGAALRIATKMKRKGAREVPVDRLAERAEPSDRAATPEKLLDEERARALLYQLLSELEERLRVVFVMFELEGMTMPEIAEVIDIPVGTVASRLRHAREDFRARLERHRARTRREVGT*