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scnpilot_p_inoc_scaffold_560_55

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 66764..67321

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8V0_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 171.0
  • Bit_score: 136
  • Evalue 2.80e-29
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EYF02714.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 177.0
  • Bit_score: 142
  • Evalue 7.00e-31
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 171.0
  • Bit_score: 136
  • Evalue 7.80e-30

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGATGGCCCGCGACGACGACTCGTCACCGCCCGCCACGGACGCGTCGCCCACCGAGCGCTTCGAGCATCTCGTTCGAACGCACTACACCTTCGTCTGGCGAACCTCGCGACGACTCGGCGTTCGCCCGGCGGATCTGGATGACGCCATTCAAGAGGTCTTCCTCGTGGCGGCCAGGAACCTCGATTCAATCACCTACGAGCGCGCCTACTTGTTCCGGGTCTGCGTGTTCGTGGCCTCGCAATCACGTCGGACGGCCCGAAGGCGGCGCGAAATCCACGACGAGCAGCACCTCGAAACCGCCCTCGACCATGCCGCCAGCCCCGAAGAGCATGTTCAAGCGAACGAAGCCCGCCGGACGCTCCAAGGGGTCCTCGACGATATGCCCGAGGAGCTGAGGGTCGTCTTCGTTCTTCACGAGCTCGAGCGTTTCACCATGTCCCAAATTGCCGACACGATGAGTCAGCCCGCGGGCACCGTCGCTTCTCGCCTCCGTCGCGCGCGAGAGGTGTTCATGAAACTCGCCGCTGCGCGCACGAAAGACTGGGGCAATCGATGA
PROTEIN sequence
Length: 186
MMARDDDSSPPATDASPTERFEHLVRTHYTFVWRTSRRLGVRPADLDDAIQEVFLVAARNLDSITYERAYLFRVCVFVASQSRRTARRRREIHDEQHLETALDHAASPEEHVQANEARRTLQGVLDDMPEELRVVFVLHELERFTMSQIADTMSQPAGTVASRLRRAREVFMKLAAARTKDWGNR*