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scnpilot_p_inoc_scaffold_875_20

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(21300..21623)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion apparatus protein, YscI/HrpB family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P0V9_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 111.0
  • Bit_score: 61
  • Evalue 5.00e-07
ATP-dependent helicase HrpB {ECO:0000313|EMBL:KFA89534.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 30.9
  • Coverage: 110.0
  • Bit_score: 62
  • Evalue 5.30e-07
YscI/HrpB family type III secretion apparatus protein similarity KEGG
DB: KEGG
  • Identity: 29.2
  • Coverage: 113.0
  • Bit_score: 60
  • Evalue 3.10e-07

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Taxonomy

Cystobacter violaceus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGACAACCGATCTGCCGGAGAGGTCGTCGAAGCTCGAGAAAGCAGCGGGAGGGCATCGGGCGCCGCCGGCTGCGGCAGCGCCCGCGAGCGACGGGCCGAGCCCGTTCGCGCGCATCCTGCGCGGCCTCGGACGCGAGGTCGACCGCGGAGAGGCGCTCGTGCATCGGGCCGTCAGCGGCGCCAGCGGGGGCAAGGAGCTCGGCAACATGGAGCTCATTGCCCTCCAAGCCGGCGTCTACCGTTACAGCGAGGCCGTCGACCTCTCGGCGAAGCTCGTCGATCGCGCAGCGAACGGGGTCAAGACCGTGCTCCAAGGCCAGTGA
PROTEIN sequence
Length: 108
MTTDLPERSSKLEKAAGGHRAPPAAAAPASDGPSPFARILRGLGREVDRGEALVHRAVSGASGGKELGNMELIALQAGVYRYSEAVDLSAKLVDRAANGVKTVLQGQ*