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scnpilot_p_inoc_scaffold_685_20

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(14866..15537)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S3Z9K7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 30.8
  • Coverage: 208.0
  • Bit_score: 72
  • Evalue 7.70e-10
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4 similarity UNIPROT
DB: UniProtKB
  • Identity: 30.8
  • Coverage: 208.0
  • Bit_score: 72
  • Evalue 1.10e-09
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 25.5
  • Coverage: 196.0
  • Bit_score: 66
  • Evalue 1.60e-08

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Taxonomy

Streptomyces aurantiacus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGGCTCGCCCGCTGCTCCGTCTGGTCGCGACCGACGCACCTGCGGCGACGCTCGCGGCGACCGTCGGGCCGAGAGTCCCTGCGCTGGACGACGCCCAGCTCCTCGCGGCAGTGCACAGCGGCGACGAGGACGCGGCAGCCGAGCTGCACGATCGCTTGCGACCACGCGTCGACACCACGATCCGAGCCCTCGTCGGACCCGGCCATTCCGAGCACGACGACCTCGCGCAGCAGAGCTTCGTCGAGCTCGTGCTCTCGCTGCACCGTTACCGGGGAGAATGCTCCCTCGAGACCTGGGCGGCGACGATCGCCGCTCGCACGGTTTTCAAGTTCCTGAGACGGCGCACCACGGAGAGGAAGATCTTCGAGCGCGCGCAGGAAGACGGGCAAGTGGAGAGCTCGAGCCCGATGAGCCTCCAGCGGCAGTTGACGGCGCGGAACATCGCCGGCCGAATCCGCGAGCACCTCGGGCGCATCGACGCCGCCAAGGCGGAGGCATACCTCCTCCATGACGTCTGCGGCTTCGACGCGCGAGAGGTCGCCGGCATCGCCGGGATCAGCGAGGCCGCCGCTCACGCTCGGATCGCGCGCGGGCGTCGCGAGCTCCACGAGAAGCTCGCCGCCGATCCCGAGCTTCGAGACGCTCTCGTCGATCTGGAGGTGGAGCCTTGA
PROTEIN sequence
Length: 224
MARPLLRLVATDAPAATLAATVGPRVPALDDAQLLAAVHSGDEDAAAELHDRLRPRVDTTIRALVGPGHSEHDDLAQQSFVELVLSLHRYRGECSLETWAATIAARTVFKFLRRRTTERKIFERAQEDGQVESSSPMSLQRQLTARNIAGRIREHLGRIDAAKAEAYLLHDVCGFDAREVAGIAGISEAAAHARIARGRRELHEKLAADPELRDALVDLEVEP*