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scnpilot_p_inoc_scaffold_688_9

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 11382..11960

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G1L9_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 188.0
  • Bit_score: 149
  • Evalue 3.30e-33
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 188.0
  • Bit_score: 149
  • Evalue 9.20e-34
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN92524.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 188.0
  • Bit_score: 149
  • Evalue 4.60e-33

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGAGCGAGCTCGGCGACGCCTTGGCCATGGAGCAATTCCCGCCGCGGGCGCAGGAGCTGGACGTCACCGTGATCTACAAGGAGCACGGGGCCTTCGTCTGGGCTTCGCTGTCGCGCCTCAGCGTGCGCGATGCCGACCTCGAAGACATGCTCCAGGAGGTCTTCGTCATCGCTCACGCGAAGCTCGCGTCCTTTCGCGGCGACGCTCACGTTCGGACGTGGCTGTTCGAGATCTGCAGGCGCGTGGCGCGCAACTATCGCCGGAAGGCAAGTCATCGCCGCGAGACACAGTCGAGCGACGCCGTCGAGGTGGAGTCGCTCGAGAGGAACCCGGAGCAAGCGTTCGTACAGAGAGAAGAGCAGCGGCGTGTCGAAGAGATCCTCTGGAACATGGATGTCGACAAGCGGGCCATCTTCGTCATGTTCGAGGCGGAGCACCTGCGGGCCGAGGAGATCGCCGAGATGCTCGGCGTCCCGCCCAGCACGGTGAGATCGCGCATCGCCGCTGCGCGGAAGGAATTCGGAAAAGAGGCGCGCAGGCTGCACCTCCTCAACGAGAGTCGAGAGAAGAGAACGTGA
PROTEIN sequence
Length: 193
VSELGDALAMEQFPPRAQELDVTVIYKEHGAFVWASLSRLSVRDADLEDMLQEVFVIAHAKLASFRGDAHVRTWLFEICRRVARNYRRKASHRRETQSSDAVEVESLERNPEQAFVQREEQRRVEEILWNMDVDKRAIFVMFEAEHLRAEEIAEMLGVPPSTVRSRIAAARKEFGKEARRLHLLNESREKRT*