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scnpilot_p_inoc_scaffold_688_33

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 39240..39848

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor, sigma-24 homolog n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE20_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 181.0
  • Bit_score: 126
  • Evalue 3.10e-26
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 189.0
  • Bit_score: 143
  • Evalue 3.40e-31
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 189.0
  • Bit_score: 128
  • Evalue 1.80e-27

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGTCGGAAGGGCGCGCAGACGCGGATCTCCTCAGGCTGGTCGCCGAGGGGAACGTCCGCGCCGTGGGCGAGCTCTACGATCGCTACGCGTCGACGCTGTTCCCGATCGCCCTGCGCATCGTCCGCGAGCGCTCCGAGGCGGAGGATGTCCTCCACGACGCGTTCGTCGTCGTGAGCGAGCGCGCGACCCAGTACGCCGTCGACCGAGGGTCGGTCGTGGCATGGCTCGTCACGCTGGTGCGCAACCTCAGCATCGACCGCGCACGCCGGCGGGAGCGGCGCGGGGCGCTCACGCGCGAGCTCCTTTCGCACGAGCCACCCGCCTCGGTACGCGATCCGGAGCGATTGACCTCCGAGGCGAGTGAGCGCGCGAAGATCCGACGAGCCCTCGCGAGCTTGCCCGAGGCAGGGCGGCAGACACTCGAGGTCGCCTTCTTCGAGGGGCTCAGTTATCCCGAGATCGCCGCGCGGGAGAACGTGCCGGTCGGGACGATCAAGTCGCGCGCGGCGCGCGCGCTTGCGGCGCTTCGCGAGGCGCTCATGACGGAAGGCGTCGTGCTGGAGACGGCGGCCTTCGGATCAGGACAAGGACCAGGGAAGCACCGATGA
PROTEIN sequence
Length: 203
MSEGRADADLLRLVAEGNVRAVGELYDRYASTLFPIALRIVRERSEAEDVLHDAFVVVSERATQYAVDRGSVVAWLVTLVRNLSIDRARRRERRGALTRELLSHEPPASVRDPERLTSEASERAKIRRALASLPEAGRQTLEVAFFEGLSYPEIAARENVPVGTIKSRAARALAALREALMTEGVVLETAAFGSGQGPGKHR*