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scnpilot_p_inoc_scaffold_780_19

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(25784..26317)

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYE7_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 161.0
  • Bit_score: 141
  • Evalue 8.20e-31
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EYF02714.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 173.0
  • Bit_score: 145
  • Evalue 6.10e-32
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 161.0
  • Bit_score: 141
  • Evalue 2.30e-31

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGGTGGGCGTCGCCGTCGTCGCCCGTGAAGAGCGACTGCGGCGCGCGGTGGACGAACACTATTTGTTCGTCTGGCGTGCGCTCCGGCGTCTCGGCGTCCCCGCCGGCGAAGCCGACGACGTGGCGCAGGAGGTCTTCCTCCTCTTCTCCCGCAAGCTCGACGAGATCGAGCCTCGGGTCGAGCGAGCCTTCTTGTTCCGCAGCGCGACGTACCTCGCGATGCACGCGCAGCGGAAGTTCCGGCGACGCCGGACGCTCGAAGAGAGCGCCGCGATGCTCGAGACGGAGGACATGCACCCGAGCGCGGAGGAAGACGCCGAGCGGCAGGAAGAGCTCGCGCTGCTCGACAGCCTCCTCGAGAAGCTGTCCGAGGAGCTCCGCACCGTCGTCATTCTCTGCGACCTCGAAGAAATGACCATGCCCGAGGCCGCTGAGATCCTCGGGGTCCCCACCGGCACCGTCGCGTCGCGACTTCGCCGCGCGCGTGCAGACCTCTCGGCCGCCATGTCTCGACACAAAAGGACGCAGCGATGA
PROTEIN sequence
Length: 178
MVGVAVVAREERLRRAVDEHYLFVWRALRRLGVPAGEADDVAQEVFLLFSRKLDEIEPRVERAFLFRSATYLAMHAQRKFRRRRTLEESAAMLETEDMHPSAEEDAERQEELALLDSLLEKLSEELRTVVILCDLEEMTMPEAAEILGVPTGTVASRLRRARADLSAAMSRHKRTQR*