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scnpilot_p_inoc_scaffold_1257_11

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 8058..9032

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003653E93 similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 289.0
  • Bit_score: 313
  • Evalue 2.20e-82
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 318.0
  • Bit_score: 308
  • Evalue 2.60e-81
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS19158.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 318.0
  • Bit_score: 308
  • Evalue 1.30e-80

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGGATCGCTTCGCCGTGATGAGCGTGTTCGTACGTGTCGTGGAGACCGGCAGCTTCACGAAGGCAGCGGTGTCGCTCGGTGTATCGAGAGCGACCGTCTCGGTGTCGATCCAGCAGCTCGAAGATCGGCTTGGCGTGCGGCTGCTCCACCGCACGACTCGTCGCGTGAGCCTCACGAGCGAGGGCCTGCTCTACCACGAGAAGGCGCGCGACGTGCTCGCGAAGCTGGACGCGACGGAGCAGCTCTTCCGCGAGGCGCAGCCTCGCGTGTCCGGGCGTCTCTCGATCGACGCTCCGACGAGGATCGCTCGACGCGTGCTCATCCCCGCGCTCCCCGAGCTCCTGGCACGGCACCCCGATCTCGAGATCCACCTCGGTGCCTCCGACCGAACGATCAACCTCGTCGAGAAGGGTGTCGACGCGGTGCTTCGCGTCGGGCCGCTCCGCGATTCGAGCCACATCGCTCGGCCTCTCGGGCTTCTGGCGCAGAGCAACTGTGCCAGCCCTCGCTATCTGGCTCGCTACGGCCAGCCGACCACGCTCGAGGAGCTCGACGATCACCTCGTGGTCACCTACGCACCGAATCTCTCGGGTTCGGGAACCTGGGACTACGTCGTGGACGGCGAGGCGCGGTCTCGGCCGATGCGCAGCGCCGTCGCCGTGGACAACGCCGAGACGTACGTCGCCGCCGGCCTGTCCGGGCTCGGGCTCATCCAGATCCCGGCGTACGACGTGAGGCATCACTTCGAGTCCGGCGCGCTCGTCTCCGTGATGCCCCAACACCAGGCCCCAGCGCTTCCCATCTCCCTCGTGTATCCGAGCCGAAAGCAGGTCCCGCAACGGCTGCAGCTCTTCGCGACCTGGGCGGCCGCGCTCTTCGAGCGCCATGGAATGCTCGCGAGCGGCCCGGGCATCGAGCGACTTTCGCCGCGCCGCCGCGAGCCGGCCCGCCAGCAGGGTCGCGCGTCCCGTTGA
PROTEIN sequence
Length: 325
MDRFAVMSVFVRVVETGSFTKAAVSLGVSRATVSVSIQQLEDRLGVRLLHRTTRRVSLTSEGLLYHEKARDVLAKLDATEQLFREAQPRVSGRLSIDAPTRIARRVLIPALPELLARHPDLEIHLGASDRTINLVEKGVDAVLRVGPLRDSSHIARPLGLLAQSNCASPRYLARYGQPTTLEELDDHLVVTYAPNLSGSGTWDYVVDGEARSRPMRSAVAVDNAETYVAAGLSGLGLIQIPAYDVRHHFESGALVSVMPQHQAPALPISLVYPSRKQVPQRLQLFATWAAALFERHGMLASGPGIERLSPRRREPARQQGRASR*