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scnpilot_p_inoc_scaffold_796_27

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(31883..33412)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 509.0
  • Bit_score: 768
  • Evalue 7.20e-219
RNA-splicing ligase RtcB n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RZP3_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 477.0
  • Bit_score: 333
  • Evalue 3.20e-88
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 479.0
  • Bit_score: 330
  • Evalue 7.70e-88

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1530
ATGTCCAAGGCACGCGCTCTCCTCGAAAACGAGAACGACTGGAAGCGGCGCGCCGAGTGGGTGGACGGCGCGGAGGGCGGCTACTTCCGCCTCGAGACCGCCGACACCGGCGAGGTGCCGGTTCGTCTCTTCGTCACGCCGAAGCTCCTCGGCGAGGCCGAGCCCACGCTCTATCGGCAGGTCGTCAACGCGACGCGCTTCCCGGGCGTGAAGCTCGTGTGCGTCACGCCGGACGTCCACTACGGCTACGGCGTGCCCGTCGGTTGCGTCATCCTCACCGATCGCAACGAGGGCTCCATCGCGATGGGTCCCGTCGGGTTCGACATCGGATGCGGAATGATGAGCGCGCGGAGCAACGTCCCCGCCGAGCTCGCAACGCCCGACCGGAAGCTCGCGTTCAACCGCGAGGTCTCGAATCGCGTGAGCCTCGGCGCGGGCGGCAAGAGCGTGAAGCTCGGCACGCTGTCCGAGAAGGAGCTCCAGGAGCTCGTGCGCGGCGGCGCCGAGCACTACGTCGACAAGTACGGCGCGACCTTCGACCGGAGCCGCGCCGAGCGCCATCGCATCCCGGTCGACGACCGCTGGGACATCCCGTGGGGCGGCAAGGGCTCGCCCGAGCGCGGCCTCGCTCAGCTCGGCTCGCTCGGTGGAGGCAACCACTTCATCGAGCTGCAGCGCTGCGAGGAGACCGGCACGCTCTTCGTCCAGGTCCACACGGGCAGCCGCGGCTTCGGCCATGGCCTCGCGACGAACTACTTCGAGATGGCGAAGGACGAGCGCGCCGCGAAGGGCGAGCCGCTCACCGATCTCGATCTCGGCTTCTTCACGCCCGAGTCCAAGCACTTCGGCTCGTACCTCAACGCGGTCGCCGCGGGCGGCAACTACGCCATCCTGAACCGTCTCGTCATCTACGAGCAGATCGCCGACGCGTTCCGCAAGGTCTTCAAGGAGGACCTCGAGCTCGTCTACGAGATCAGCCACAACCTCGTGCAGGCGGAGGAGCACCCCGACTTCGCCGAGGTCTGGGTGCATCGCAAGGGCGCGACCCGCGCGTTCCCCGGCGGTCACCCCGCGCTCGCCGGTACCCGCTGGGCGGAGACGGGCCACCCCGTGCTCATCCCCGGATCGAACCGCGACTACAGCTACGTCCTCATGCCGGAAGCCGGCGCGCACAAGAGCGGCTTCTCCGTGAACCACGGCGCGGGCCGCCGGCTCTCGCGCGGCGAGGCCATGCGCCAGCTCGATCAGCGCAAGGTCGACGAGCAGTACCGTCGCGACGACATCCTCGTGAACCTCGACGGTCGCGTCCCGCTCGACGAGTCGAGCCACTGCTACAAGAGCGCCGAGGAGGTCGTCTCCGCGGTCGTCGCGGCGGGGCTCGCGCGCGTCGAGCACACGCTCTGGCCGCTCGCGTCGATCAAGGGCAACGAGGAGGGCGCGGCGCGCGATCGACGCCGGAAGAACAAGGCGAAGGATCGCTCACGCGACCGCGATCGCGACGCGGCTCGCAAGACGAAGGGCCACTACTGA
PROTEIN sequence
Length: 510
MSKARALLENENDWKRRAEWVDGAEGGYFRLETADTGEVPVRLFVTPKLLGEAEPTLYRQVVNATRFPGVKLVCVTPDVHYGYGVPVGCVILTDRNEGSIAMGPVGFDIGCGMMSARSNVPAELATPDRKLAFNREVSNRVSLGAGGKSVKLGTLSEKELQELVRGGAEHYVDKYGATFDRSRAERHRIPVDDRWDIPWGGKGSPERGLAQLGSLGGGNHFIELQRCEETGTLFVQVHTGSRGFGHGLATNYFEMAKDERAAKGEPLTDLDLGFFTPESKHFGSYLNAVAAGGNYAILNRLVIYEQIADAFRKVFKEDLELVYEISHNLVQAEEHPDFAEVWVHRKGATRAFPGGHPALAGTRWAETGHPVLIPGSNRDYSYVLMPEAGAHKSGFSVNHGAGRRLSRGEAMRQLDQRKVDEQYRRDDILVNLDGRVPLDESSHCYKSAEEVVSAVVAAGLARVEHTLWPLASIKGNEEGAARDRRRKNKAKDRSRDRDRDAARKTKGHY*