ggKbase home page

scnpilot_p_inoc_scaffold_804_2

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 973..1332

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DH89_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 119.0
  • Bit_score: 118
  • Evalue 5.00e-24
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EGV50012.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 119.0
  • Bit_score: 118
  • Evalue 7.00e-24
cold-shock DNA-binding protein family protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 119.0
  • Bit_score: 115
  • Evalue 1.20e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

endosymbiont of Riftia pachyptila → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGCAAAGCCCTCTTCGAATCACGATGCGGGACATCCCCCCGAGCGACGCCATCGAGCAACACGTTCGCCAGCGTGCGTCCAAGCTCGAGCGGCTCTGCTCGACGCTGACTGCCTGTCACGTCACGATCGAGACGCCGCATCGGCACAAGACGCACGGGAACCACTATCGCGTCCGAATCGACCTCTCGGTGCCGGGGACCGAGTTGGTCGTCGCACGCGATCCGGCCGAGCGACGCGAGCACGAGGACGCCTACGCCGCTATCGATGCCGCCTTCGAGGATGCCGAACGCATGCTCAAGGACCACATCCAGAAGAAGCGTTCTGCCACCAGACGCACTGAAGCGCGCATCGACGGGTGA
PROTEIN sequence
Length: 120
MQSPLRITMRDIPPSDAIEQHVRQRASKLERLCSTLTACHVTIETPHRHKTHGNHYRVRIDLSVPGTELVVARDPAERREHEDAYAAIDAAFEDAERMLKDHIQKKRSATRRTEARIDG*