ggKbase home page

scnpilot_p_inoc_scaffold_1112_5

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(2733..3335)

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8V0_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 186.0
  • Bit_score: 161
  • Evalue 1.10e-36
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 186.0
  • Bit_score: 161
  • Evalue 3.20e-37
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN99073.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 186.0
  • Bit_score: 161
  • Evalue 1.60e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
GTGATCAAATCGCTCGTCGCCGGCCAAGTCCCGGTCGGAACCCGCGTGCAGCAGCCGGTGACGATCGAGCAGGACGAGAACGACGCACAGGTACGCGTCCTCGTCGATCTGCACTTCGATTTCGTGTGGCGCTCGCTGCGCCGCCTCGGGGTTCCGGATGCACAGCTCGACGACGCCGCGCAGCAGGTCTGGATCGCCGTGTCGCAGAAGCGACAGGAGGTCCGCAGCGAGACCGCACGTGCGTTCCTCTTTGCGATCGCGTTGCGCGTCGCGTCCGATGTACGCCGTTCGCTACGTCGTCGCCGCGAGGTCGACGTCGAAGATCGCGAGCCGGTCGACGAGCGCCCCGGTCCGGATGAGCTGGTCGACCACAAGCGCTCGCGTGTCATCCTCGACGAGATCCTCGATGCGATGCCCGAAGAGGTCCGTGCGGTCTTCGTGCTCTACGAGCTCGATCAGCTGAGCATGGCCGAGATCGCGGGCATCCTCGGAGTGCCGCCGGGCACGGTGGCGTCCCGGCTTCGGCGCGGACGCGAGCTCTTCGAGAACGAGATGAAGCGCGTACGTGCGCGTGAGGCTTTCCGCTCGGGAGGTTCGCGATGA
PROTEIN sequence
Length: 201
VIKSLVAGQVPVGTRVQQPVTIEQDENDAQVRVLVDLHFDFVWRSLRRLGVPDAQLDDAAQQVWIAVSQKRQEVRSETARAFLFAIALRVASDVRRSLRRRREVDVEDREPVDERPGPDELVDHKRSRVILDEILDAMPEEVRAVFVLYELDQLSMAEIAGILGVPPGTVASRLRRGRELFENEMKRVRAREAFRSGGSR*