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scnpilot_p_inoc_scaffold_1131_3

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(1205..2659)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESS1_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 431.0
  • Bit_score: 563
  • Evalue 1.80e-157
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 428.0
  • Bit_score: 563
  • Evalue 5.10e-158
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715, ECO:0000313|EMBL:CAN97413.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 431.0
  • Bit_score: 563
  • Evalue 2.60e-157

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
ATGAGCAAGAAGAGCAACGCCGCGCTCGCTGAGCCTGTCGTCGCCCCGCCCGATGACGAGTCCGACGCGGACCTCGCCGGAGGCTCGAGCCCGAACGCGGAGGGCGAAGGCGAGGTCGTCGTCCTCGAAGACGAGTTCGAGTTCGAGGAGGCATCCGAAACCGAGGAAAGCGGCGAAGAGCGTCCGCGATCCACCACCAAGGCGAAGGTGGAGGAAGGCGGCGGCGACTCGATGCTCGCGCGCTACTTCCGCGAGATGGCGACCCACCCCGTCATGGGGCAGGAAGAAGAGCTCGGCACCGCGGTCGACGTCGAGAAGGCCGAGATCGAGCACTGGTGTGCCATCCTCTCTTTCCTCCCCGCGGTGGAGCACGCTCTCGACGCGCTCGAAGCCGACCTCCCGAAGGACGAGGAGGCGATCGACCTCCCGCAGATCGGCGAGCTGCGAAAGTTCTGCAAGACGTACAAGAAGCAGCGCAACAAGCTCACCAAAGAGCAGGAGAAGAAGTACCGCGCGGTGAGCGAGAGCCTCGGGCGGGCGATCCGACTCGCGGACTCCGATCGCCTCTGGATCGCGCACGCCGAGGAGACCGTCCGGAAGCTCGGCGCCCCGCCGGCGGTCGAGGACGTCGAGGAGGAGGGCATCGCGATCGCGCAAGCAGCCGGAACGCCGGACCCCGACGCTCCGACCCTCGCGAACACGCCGGCCTTCAAGAAGTACCTCACGTCGATCTCGGAGGCTTCGCGCCATAGCAAGCGCGTGAAGAACAAGTTCGTGAAGGCGAACCTCCGGCTCGTCGTCTCGATCGCTCGTCGCTACAACCGGGGCCGCCTTCCGCTCATCGATCTGATCCAGGAGGGCAACATCGGCTTGATGAAGGCGGTCGAGCGCTTCGATCACACGCGCGGCTACCGCTTCTCGACCTACGCCTCGTGGTGGATCCGTCATGCGATCAGCCGTGCGCTCGCCGACAAGGGCCGCGCCGTCCGCATCCCGGTCCACATGCTCGACACGCACAACCGGGTGCAGCGCGCCACGCAGGCAGTCATCGCGCGCACGGGCCGCGACCCGACGCTCGACGAGCTCGAGAAGGAGACGGGCATCCCCCAGGAGAAGCTCGACAAGGTGAAGGGCGCGTGGGCGGAGACGCCGTTCTCGCTCGATCGCCCGGTCGGCGACGAGGACGGGCGAAAGTTCATCGACTTCCTCCAGGACGAGAACATGCAGTCGCCCTACGAGACCCTCATCTCGCAGAAGTGGGGCGAAGAGGTGCGGCGCCTGCTCGGCCATCTCACGCCGATCGAGTCGCGCATCATCCGCTGGCGCTTCGGCCTCGACGACGAAGACGAGCTCACGCTCAAGGAAATCGGCGACAAGTACAACCTGTCGCGCGAGCGCATCCGCCAGCTCCAGGAGCAGGCCCTCGGCAAGATCCGCAAGCACATGCGTGACTGA
PROTEIN sequence
Length: 485
MSKKSNAALAEPVVAPPDDESDADLAGGSSPNAEGEGEVVVLEDEFEFEEASETEESGEERPRSTTKAKVEEGGGDSMLARYFREMATHPVMGQEEELGTAVDVEKAEIEHWCAILSFLPAVEHALDALEADLPKDEEAIDLPQIGELRKFCKTYKKQRNKLTKEQEKKYRAVSESLGRAIRLADSDRLWIAHAEETVRKLGAPPAVEDVEEEGIAIAQAAGTPDPDAPTLANTPAFKKYLTSISEASRHSKRVKNKFVKANLRLVVSIARRYNRGRLPLIDLIQEGNIGLMKAVERFDHTRGYRFSTYASWWIRHAISRALADKGRAVRIPVHMLDTHNRVQRATQAVIARTGRDPTLDELEKETGIPQEKLDKVKGAWAETPFSLDRPVGDEDGRKFIDFLQDENMQSPYETLISQKWGEEVRRLLGHLTPIESRIIRWRFGLDDEDELTLKEIGDKYNLSRERIRQLQEQALGKIRKHMRD*