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scnpilot_p_inoc_scaffold_1131_11

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 11637..12641

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000361C037 similarity UNIREF
DB: UNIREF100
  • Identity: 30.9
  • Coverage: 337.0
  • Bit_score: 153
  • Evalue 3.90e-34
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EYF04414.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Poly similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 330.0
  • Bit_score: 288
  • Evalue 1.40e-74
TRAP dicarboxylate transporter-DctP subunit similarity KEGG
DB: KEGG
  • Identity: 31.4
  • Coverage: 331.0
  • Bit_score: 148
  • Evalue 2.70e-33

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGCTTCGAAGATTCGTCACGATGGTCGCCGTCATGGCGGCCATGCTTGGCTTCTCCCGGACCGCACTCGCGGACGCGAAGGAGATCAAGCTGGGAACCCTCGCGCCGAAGGACTCTGCCTGGGGCAAAGTCTTCAACGCGTGGAGCAAGGCTGTCGAAGAGGAGAGCAGCGGAGCGGTCAAGCTCACGTGGTTCTTCAACGGCAGCAAGGGCGACGAGGTCGCCATGGTCGGCAAGATGCGCAGCAAGGAGCTCGACGGCGCGGCGATCACCGCGACCGGGCTCACGCAGATCTGGCCGCACATCGGCGCGCTCCAGATGCCGGGCCTCTTCCCCACCTGGGCGAAGCTCGACTCCGTCCGCGAGAAGGTGTCGCCCAAGTTCGACAAGGAGTTCGCGCAGCAGGGCTTCGTCATCCTCGGCAAGGGTGACGTCGGCATGGCGCACCTCATGTCGCGCGGCATGGCGGTTCGCACGCCGGAGGACCTGAAGAAGGCGCACCCGTTCTACATCGCGGGTGATCCCATCGGTCAGAAGTTCCTCGAGACCGTCGGCGTCCCGTCGCCGAAGGCCCTCGGTGTCCCGGCGATCCTCCCCGCCGTCTCCTCGCGCGGCGAAGGCGCGATCGACGTGATCAACTCGCCGTCGATCGCGGCCGAGCAGCTCGGGTGGGCGCCGCACATGACGCACATCAACAACCTCCCGAGCGGCATCGGCATCGGCGCGCTCGTCATGTACAAGGAGACCTACGACGGCCTCCCGGCCGACGCGAAGGCCATCCTCGAGCGCACCGGCAAGAACACCGGCAAGCTCCTCACCGATCGCATCCGCGCGATCGACGAGGCGGCGTTCAACCGCCTGAAGGCGAGCAAGACGGTCGTCGAGCTGAACGACGCGGAGAAGGCCGCCTGGGCGGCGGTGTTCACGAAGGTCCGCAACGCGCTCAAGGCGGAAGGCAAGATCCGCGCGGACGTGTTCGACGAGGTCGTCAACGCCGCGAAGTGA
PROTEIN sequence
Length: 335
MLRRFVTMVAVMAAMLGFSRTALADAKEIKLGTLAPKDSAWGKVFNAWSKAVEEESSGAVKLTWFFNGSKGDEVAMVGKMRSKELDGAAITATGLTQIWPHIGALQMPGLFPTWAKLDSVREKVSPKFDKEFAQQGFVILGKGDVGMAHLMSRGMAVRTPEDLKKAHPFYIAGDPIGQKFLETVGVPSPKALGVPAILPAVSSRGEGAIDVINSPSIAAEQLGWAPHMTHINNLPSGIGIGALVMYKETYDGLPADAKAILERTGKNTGKLLTDRIRAIDEAAFNRLKASKTVVELNDAEKAAWAAVFTKVRNALKAEGKIRADVFDEVVNAAK*