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scnpilot_p_inoc_scaffold_1419_11

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 11359..11913

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XYI8_PSEMY similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 182.0
  • Bit_score: 120
  • Evalue 2.00e-24
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 180.0
  • Bit_score: 120
  • Evalue 5.70e-25
TetR family transcriptional regulator {ECO:0000313|EMBL:EZH83616.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas o similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 180.0
  • Bit_score: 120
  • Evalue 2.80e-24

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
GTGGTCGAGAACGGCATCCTCGTCGCCGCGATGAAGGTGTTCGCTCGCCGCGGCTTCACCGCGACGCGCGTGGAAGACGTCCTCGAAGAGGCGAGGATCGCTCGGCGTACGTTCTATCGCTATTTCACGAGCAAGGAAGACGTCCTCGCCGCCGTGTACGAGCTCGCGACGGGGGAGCTCCTCGGCGCGCTCGACGAGGCGTCCGTGGCGGAGGACGGTTCGATGTCCGGGGTCCGTGCGGGCGTCGATCTGTATCTCGATTTCCACGTCGAGAATGCGGCGCTCTTCCGGGTGCTCGTCGAGCAGTCGGTGCGCTCCGACTCCCCGCTCGCGGGGCATCGCCGTCAGTTTCGCGCGCGGATCTTGAGGGTTCTCGTCCAGGCGGCCGAGGCGCGAGGTGTCGCGCCGCTCGATGGCTTCACCTACGTGGCGCTCGTCTCCGCGCTCGAAGGCGTGGCGCTCGAGCTGCTCGAAGGGGCCGCGTCGACGAACGACATCGCGCGTGCGAAGAAGGCGATGCTCGCGCTGGTCGAGAGCGGCCTCGCTGGCCCGTAG
PROTEIN sequence
Length: 185
VVENGILVAAMKVFARRGFTATRVEDVLEEARIARRTFYRYFTSKEDVLAAVYELATGELLGALDEASVAEDGSMSGVRAGVDLYLDFHVENAALFRVLVEQSVRSDSPLAGHRRQFRARILRVLVQAAEARGVAPLDGFTYVALVSALEGVALELLEGAASTNDIARAKKAMLALVESGLAGP*