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scnpilot_p_inoc_scaffold_1436_23

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 19632..20963

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GLY8_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 451.0
  • Bit_score: 291
  • Evalue 1.60e-75
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Ch similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 449.0
  • Bit_score: 311
  • Evalue 1.60e-81
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 451.0
  • Bit_score: 291
  • Evalue 4.50e-76

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGGAAGGCGTTTCTCAGTCCAAGACCCAGTCATCTCGTAGCACGCCGAGCCGAAACGCGCGTGGCGCGCGCGCTCGCGCTCGTGTCGCACGCGAAACGCCGAAACGCCCCGCCGCGAGAGCGGCACGGCGGGTGGGCACGGCGCGGGAGGGCGTCGGGATCGACGATCTCTATCTCGCAGAGATGGCCGAGAGCTCGGTGCTCACTGCGGCGCAAGAGCTCGAGATCGGCGAGCGCATCGCTTCCGCCGAGCGCACGATCCTCGATGCGCTGTTCACCTGTCCCGCCGGGACGGGAGCCCTCGGAAGGCTGGCGGATGACCTCGAGGCGGGTCGCGCCAGCGCACGGGACCTCATCCTCAACCCGGACCAGGCCGATCTCGACATCAAGGCGACGACCGAGCTCCTCCGTAGCGCGCTCGGCTCCGCCCGCTCGGACGACGACGCCGCGCGCAGGACGGGCGCGTCGGAGATCGCCAAGGTGCGCCTCGACGACGACGTGCTCGCCGCCCTGATCGCGAGCGTGCGGGAGGCGCCGTCTAACGGAGAGGGTGCGGAGATCGACTCTCACGACCTCGATGCACTCGCGACGATCGACCGAGCCGAGGTGGAGATCGAAAGAGCCAAGGGTAGGCTCGTGACGGGCAACCTTCGCCTCGTCGTGCTCTTCGCACGGAAGTACCTCGGGCGTGGGGTCGCGCTGCTGGACCTCGTGCAGGAAGGCAACCTCGGGCTCCTCCGCGCGGCCGACAAGTTCGATCACCGGCGCGGCTTCCGCTTCAGCACGTACGCGGCGTGGTGGATCAAGCAATCGCTCCAGCGCGCCTTGCTCGATCGGACGGTGCGCCTACCCGTGCACGTCGCCGACGACCGGCGGCGCATCGCCAAGCTGCGCGCTGCGTTCGTCGCGCAGCACGAGCGCGAGCCCACGGTCGAGGAGATCTCGGCGCTCGCGAGCCTTGCACCGGAACGTGTCGAGAACATCCTCACGCTTCCCCCGCAGCCGTCGAGCCTCGACATTCCCGTAGGCGAAGACGGTGACGCGCGCCTCGTGGATCTCGTCCCGTCGAACGCTCCACCTCCCGATCAGACCGCGGCGCTCCACGCGCTGGGCGACCACATGGGCGAGCTCCTCGCACGGCTCGACGACCGCGAGCGGCAGATCCTCCGCCTACGCTTCGGGCTCGATCACGCGCGTGAGCACACGCTCGAGGAGGTGGGGAAGCTGCTCCACCTCACGCGCGAGCGGATCCGACAGATCGAGCAGTCCGCCCTCGCAAAGCTCCGCACCATGGCGAGCGCGAAGGAGCTGGGCAGCTACCTCGAAGAGTAG
PROTEIN sequence
Length: 444
MEGVSQSKTQSSRSTPSRNARGARARARVARETPKRPAARAARRVGTAREGVGIDDLYLAEMAESSVLTAAQELEIGERIASAERTILDALFTCPAGTGALGRLADDLEAGRASARDLILNPDQADLDIKATTELLRSALGSARSDDDAARRTGASEIAKVRLDDDVLAALIASVREAPSNGEGAEIDSHDLDALATIDRAEVEIERAKGRLVTGNLRLVVLFARKYLGRGVALLDLVQEGNLGLLRAADKFDHRRGFRFSTYAAWWIKQSLQRALLDRTVRLPVHVADDRRRIAKLRAAFVAQHEREPTVEEISALASLAPERVENILTLPPQPSSLDIPVGEDGDARLVDLVPSNAPPPDQTAALHALGDHMGELLARLDDRERQILRLRFGLDHAREHTLEEVGKLLHLTRERIRQIEQSALAKLRTMASAKELGSYLEE*