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scnpilot_p_inoc_scaffold_1525_8

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 7279..7911

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWV0_CORCM similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 203.0
  • Bit_score: 161
  • Evalue 1.20e-36
rpoE3; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 203.0
  • Bit_score: 161
  • Evalue 3.30e-37
ECF subfamily RNA polymerase sigma factor {ECO:0000313|EMBL:AFE10238.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococ similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 203.0
  • Bit_score: 161
  • Evalue 1.70e-36

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Taxonomy

Corallococcus coralloides → Corallococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGGTCGCGGCGAATCGAGCGTACATCGGCATGACGAGCGCGGAGGCCCCGAAGAGGAGCGTCGCCGCGGAGCCGCTCGCCGATGACTACGAGGCAGAGATCCGAGGAGCCGCCGCGGGCGATCGCGCGCTCACCGAGGCGCTCTTCCAGCGCCTACTACCGCGTATCCGTAACCTCGTCCGCTACCTGACGTCGGCCGACGCGGAGGCGCAGGACATCGCCCAGGAGGCCGCGCTCGCGGTCCTGCTCGGGCTGTCCGGCTACCGGGGTGACGGGTCCTTCCACGGGTGGGTCGACCGCATCGTCGTGCGCATCACGCTCGCGCGCAGGCGTCGCTCCCGAACCCTCGCCGCTCGGTCCGACGATGCTCGCGACGTCGACGAGGCCCACGAAGCCGTGAGCGCCACGCCGTTCGACGAGCGCTATGCCGCCCGCCGGAGACTGGTCCTCTTGTTCGATCAATTGCCGATCGAGCAGCGAGACGTGCTCGTGCTTCACCACGTGCTCGACATGACGGCCTCGGAGATCGGGGACCAGCTCGGCGTCTCCCCGGAGACCGTTCGCACTCGCTTGCGGCGCGCAAAGGCGCGGCTCCGAAGCCTCGTGGAGGAAGGGACTGGAGGATCGTCGTGA
PROTEIN sequence
Length: 211
MVAANRAYIGMTSAEAPKRSVAAEPLADDYEAEIRGAAAGDRALTEALFQRLLPRIRNLVRYLTSADAEAQDIAQEAALAVLLGLSGYRGDGSFHGWVDRIVVRITLARRRRSRTLAARSDDARDVDEAHEAVSATPFDERYAARRRLVLLFDQLPIEQRDVLVLHHVLDMTASEIGDQLGVSPETVRTRLRRAKARLRSLVEEGTGGSS*