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scnpilot_p_inoc_scaffold_1538_3

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(2546..3121)

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYE7_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 191.0
  • Bit_score: 145
  • Evalue 4.70e-32
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 191.0
  • Bit_score: 145
  • Evalue 1.30e-32
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN95611.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 191.0
  • Bit_score: 145
  • Evalue 6.60e-32

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
GTGAACGCAGCAACCGCCGTCGCACTGCCCGTCGAGAGGAGCGACGACTTGACGAAGCAAGATGCGCGTGCCGCTCGGCTCCGCACGCTCGTCGAAGGGTACTACGGCCAGGTCTGGCGGCTCCTATCTCACTTCGGCGTGCCGAGGGATCTGCTCGACGACGCCGCGCAGGAGGTCTTCCTCGTCGCCGCTAGGCGGATCGACGAGATCCGAGTCGATCGCGAGAAGGCGTTCCTCTCCGGCACGGCGTTTCATATCGCTCGCCGCATCTCGCGCAAAGGCTCACGCGAAGACGTCACAGAGGACATCGAAGCGGAGCCCGATCCCGCGCCCAGCCCCGAGACGTCGCTCGCCGACAAGCAGGCGCGTGAGCTGCTCGAAAAGCTGCTCGATACACTCGAGACCGATCTCCGGATGGTCTTCGTCCTCCACGAGATCGAGGGCCTCTCCAGTAGCGAGATCGCGTCGATCGTCGGGGTTCCTGTCGGGACGGCCGTTTCCCGTCTCCGGCGCGCCCGGGAAAAGTTCCAGACCGCTGTTGAAGCGCACCAGAAGCACTGGCGAGGAAAGCCGTGA
PROTEIN sequence
Length: 192
VNAATAVALPVERSDDLTKQDARAARLRTLVEGYYGQVWRLLSHFGVPRDLLDDAAQEVFLVAARRIDEIRVDREKAFLSGTAFHIARRISRKGSREDVTEDIEAEPDPAPSPETSLADKQARELLEKLLDTLETDLRMVFVLHEIEGLSSSEIASIVGVPVGTAVSRLRRAREKFQTAVEAHQKHWRGKP*