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scnpilot_p_inoc_scaffold_1582_9

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 18221..18751

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0Y5_SORCE similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 167.0
  • Bit_score: 242
  • Evalue 3.40e-61
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 167.0
  • Bit_score: 242
  • Evalue 9.60e-62
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963, ECO:0000313|EMBL:CAN94610.1}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteo similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 167.0
  • Bit_score: 242
  • Evalue 4.80e-61

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGGCGAACAAGAACCGGAACGGCAACGGCAAGGACTCGGACAAGATCGTCGAGAACGGCAAGGCCAAGGGCTTCATGACCTACGACGAGGTCAACGAGTCGCTTCCGGCCGATGTGTCCGTCGACCAGATGGACGATGTCATGGGCGTCCTCGGGGACGAGGACATCGAGATCGTCGATGCCGCCACCCAGGTAAAGATCGCGCCGAAGCGGATCGTCGAGGAGACGGCCGCCGAGCACAAGACGGTCGCCCGCCAGCCGGAGAAGGAAGACGAGGACTCGAGCTACTACTCGAAGTCCAACGACCCCGTCCGTATGTACCTCCGCAAGATGGGAAGCGTCTCGCTTCTCACGCGTGAGGGCGAGGTCGAGATCGCCAAGCGCATCGAGCAGGGCGAGCACATGATCCTCGGCGCCATCCTGGCGTCGCCGGTTGCCGTCCGCGAGATCATCGACCTCGGCGACAAGCTCCGGAAGCACAAGATTCGCGTCAAGGACATCATCCGCGACGCCGACGACGAAAACGCCGAG
PROTEIN sequence
Length: 177
MANKNRNGNGKDSDKIVENGKAKGFMTYDEVNESLPADVSVDQMDDVMGVLGDEDIEIVDAATQVKIAPKRIVEETAAEHKTVARQPEKEDEDSSYYSKSNDPVRMYLRKMGSVSLLTREGEVEIAKRIEQGEHMILGAILASPVAVREIIDLGDKLRKHKIRVKDIIRDADDENAE