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scnpilot_p_inoc_scaffold_1756_11

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(11627..12118)

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ03_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 169.0
  • Bit_score: 139
  • Evalue 2.90e-30
Uncharacterized protein {ECO:0000313|EMBL:AKF85318.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 145.0
  • Bit_score: 142
  • Evalue 6.20e-31
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 169.0
  • Bit_score: 139
  • Evalue 8.10e-31

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Taxonomy

Myxococcus fulvus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGACTCCGAGCGAGCTCGTCGAGAGCTTCGCGCCGTTCGTCTTGAGGACGCTGAAGTATCATTCGGTCGCGGAGCGGGATCTCGACGACGTCTGCCAAGAGGTCTTCATCATCATCTTTCGCAGGCTCCCGCAGTTCGACCCGGGGCGGCCGATCCGCGCCTGGATCTACGGGATCTGCATGAAAGTCGCCGCTGCCTACAGGCGGCGGGCTCGTCACCGGCGCGAGGTCCTCGTGCAAGAGGCTCCCGACGAGGTCGTGTCCGGCGCGTCTTCGGGCTCCGACGTCGTCTCGACCCAGCAGCTCGTCGCGATGCTCGCGCGCCTCGACGAGGACAAGCGCACGGTGCTCATCCTTCACGAGATCGAAGAGCTTCCGATGAGCGAGATCGCGCTCATCGTCGATTGCCCGGTGAAAACGGCGTACTCCCGGCTCGCCGCTGCCAGAAAGCAGATGCTGGTCATGATGTCCAAGTGGAATCCGAGGAGGTGA
PROTEIN sequence
Length: 164
MTPSELVESFAPFVLRTLKYHSVAERDLDDVCQEVFIIIFRRLPQFDPGRPIRAWIYGICMKVAAAYRRRARHRREVLVQEAPDEVVSGASSGSDVVSTQQLVAMLARLDEDKRTVLILHEIEELPMSEIALIVDCPVKTAYSRLAAARKQMLVMMSKWNPRR*