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scnpilot_p_inoc_scaffold_2715_4

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(2001..2567)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJ86_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 164.0
  • Bit_score: 126
  • Evalue 2.20e-26
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 191.0
  • Bit_score: 126
  • Evalue 1.10e-26
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:EDM74062.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 164.0
  • Bit_score: 126
  • Evalue 3.10e-26

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Taxonomy

Plesiocystis pacifica → Plesiocystis → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGGCAACGCGTCGGCACTCGTCTGCAGCATCGACTCGTCGCTCATGACCGACGCGCGGCTCGAAGATCACTACCGGCAGCACTTCGCGTATGTCTGGAAGAGCGCGCGCCGTCTCGGCGTCAGCGAGGCCGATGCCGACGACGTTGTGCAGGAGGCCTTCCTCGTGGCGCGAGACCTGCTCGACGCCAAGAGCCCGGCCGACGTCCGCTCGTTCCTCTTCGGCGTCGTCTACAACGTGGTTCGCCGTCATCGAAGAAGGCTCAAGTCATCCCCGCAGACGACGAGCGCCATCGACGACCTGCCGGACGCGAGCGCTCGAGGCCCGACCGCGAGCACGGAGAGGATGGAGGCGGCGCGGCTGCTCGAGAGGCTCCTCGCCCTTCTCAACGACGAGCAACGCGCCGTCTTCGTTCTTGCGGAGATCGAGCACAAGAAGCTCCGCGAGATCGGGCAGATCCTCGGGATTAACCTCAACACCGCGGCCTCGAGGCTTCGCCTCGCGAGGGCACGACTCGCGGAAGCAGCGCTTCGAATCCAGGCGCAAGAAGGTTGGAGGACACGGTGA
PROTEIN sequence
Length: 189
MGNASALVCSIDSSLMTDARLEDHYRQHFAYVWKSARRLGVSEADADDVVQEAFLVARDLLDAKSPADVRSFLFGVVYNVVRRHRRRLKSSPQTTSAIDDLPDASARGPTASTERMEAARLLERLLALLNDEQRAVFVLAEIEHKKLREIGQILGINLNTAASRLRLARARLAEAALRIQAQEGWRTR*