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scnpilot_p_inoc_scaffold_2830_6

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 6948..7766

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFY4_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 251.0
  • Bit_score: 252
  • Evalue 6.60e-64
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 251.0
  • Bit_score: 252
  • Evalue 1.90e-64
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN98067.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 251.0
  • Bit_score: 252
  • Evalue 9.30e-64

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGATGGCGGACCGGCGGGCACGCGCCCGCCACTCGACGAGCTGCACGCGTTCCGTTCATTCCGGGACGCTCTCGCGGGAGCACGCGAACGGAGAAGACGCTGCTAAGAAGGAGGTCGACGAAAGCGAGGAGGACAGCCCTCTCTCGGATCCGCCCTCCGCACCGTGGAGTGACTTTGCACTTTCACCCGATAGTAGTTCACCATGGCCGGACGTGGCGCTTCCCGACGAGCTCGAAGCCAGACTGATCGAGCGCCTGAGCGCGCGTGACGAACGCGCGTTCAACGAGCTCGTGCAGACCTACGGGCGTCGTGTGTCCGCGCTCGTCCTCCGCATGCTCGGCAACAAGGCGGAGGCGGAGGACCTGACGCAGGAGGTCTTCGTCCAGGTCTTCAAGGCGATCGGCTCGTTCCGAGGCGAGTCGAAGCTGTCGACCTGGATCTATCGAATCGCGGTGAACCTCTGCAAGAACCGCTCGAAGTACCTCAGGGTGCGTCATGCGGGCGAGCAGGACGAGCTCGAGGCCGTGGCGGAGCGAGTTCCGCTCGGCGAAGCTCGACGCGCCAACGTCGCCGTGATCGAACGCCCCGACGAGGCGCTCGGCGGCAAGCAGGTCGAGAAGATCGTCCAGGACGCGATCCAGAAGATCGATCCCGCGTTCCGCGAGTGCCTCATCTTGCGCGACGTCGAGGAGCTCTCCTACGAGGAGATCGAGCAGATCACCGGTCTCGCGGCTGGTACAGTGAAGAGCAGGATCTTCCGGGCACGCGCCCAGCTCAAGGAGATCGTCGAGCGCGAGCTCGGTGAGAAGATCGGATGA
PROTEIN sequence
Length: 273
MMADRRARARHSTSCTRSVHSGTLSREHANGEDAAKKEVDESEEDSPLSDPPSAPWSDFALSPDSSSPWPDVALPDELEARLIERLSARDERAFNELVQTYGRRVSALVLRMLGNKAEAEDLTQEVFVQVFKAIGSFRGESKLSTWIYRIAVNLCKNRSKYLRVRHAGEQDELEAVAERVPLGEARRANVAVIERPDEALGGKQVEKIVQDAIQKIDPAFRECLILRDVEELSYEEIEQITGLAAGTVKSRIFRARAQLKEIVERELGEKIG*