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scnpilot_p_inoc_scaffold_3449_12

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 13201..13674

Top 3 Functional Annotations

Value Algorithm Source
Large adhesin n=1 Tax=Paenibacillus polymyxa CR1 RepID=V5WXH4_PAEPO similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 89.0
  • Bit_score: 89
  • Evalue 4.30e-15
collagen similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 139.0
  • Bit_score: 92
  • Evalue 8.30e-17
Uncharacterized protein {ECO:0000313|EMBL:ETK35647.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024 similarity UNIPROT
DB: UniProtKB
  • Identity: 33.7
  • Coverage: 184.0
  • Bit_score: 90
  • Evalue 2.10e-15

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGGGTCCGCAAGGACCGAAGGGAGACAAGGGGAACCCCGGCCCGGCCGGTGTTCCGGGGGCGCAGGGCGCACAAGGCGCGGATGGAGTCGACGGCGTGCAGGGACCGATGGGTCCTGCCGGTGCGCCTGGAGCTCCTGGTCCGCAGGGGCCGAAAGGCGACAAGGGCGATCAGGGGACCATCCTCAACAAGGGAAGCATATACGTCGTGCATGCGTTCGCTTCGGTCACGACCGGTGCTGCGGCGCCGGCGGGGGCAACGGTCATCGCGTACTGCGATGATGCGAACGACATCGTGCTCAACGGCGGCTGCGGGCGGAACGGGTCGAACCCGAACCACCTGCTCATCAGCTCCTCACCGCACGCAGCAGACGACCCGGCCGTACGTTCGGGCTGGTCGTGCCAGTTCTACAACAACACGGTGCCGTCCTCTTTCACCGGCACGAGCTACGCGACGTGCCTCTCCGTGCCCTGA
PROTEIN sequence
Length: 158
MGPQGPKGDKGNPGPAGVPGAQGAQGADGVDGVQGPMGPAGAPGAPGPQGPKGDKGDQGTILNKGSIYVVHAFASVTTGAAAPAGATVIAYCDDANDIVLNGGCGRNGSNPNHLLISSSPHAADDPAVRSGWSCQFYNNTVPSSFTGTSYATCLSVP*