ggKbase home page

scnpilot_p_inoc_scaffold_3770_6

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: comp(6342..8849)

Top 3 Functional Annotations

Value Algorithm Source
type III effector HopL1 n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003B6EC05 similarity UNIREF
DB: UNIREF100
  • Identity: 30.0
  • Coverage: 613.0
  • Bit_score: 222
  • Evalue 1.30e-54
Putative type III effector HopL1 {ECO:0000313|EMBL:CDI01937.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus similarity UNIPROT
DB: UniProtKB
  • Identity: 29.7
  • Coverage: 634.0
  • Bit_score: 233
  • Evalue 8.00e-58
virulence factor protein similarity KEGG
DB: KEGG
  • Identity: 28.0
  • Coverage: 810.0
  • Bit_score: 215
  • Evalue 4.50e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Competibacter denitrificans → Candidatus Competibacter → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2508
ATGAGTGATCCCATCTCCACGCTCGAGCAGGCGATCGGCGAGACGCAGGCGGCGATCGTCGGGCAGGCCGAAGCGGAGAACGAGGCGCTCGTCCTCCGCGACCTCGCCCTGCGGACGCGCAAGCTCCGGCGCGCCTGGGCGCGCAAGCAGAGCGTCGGGGTCTTCGGGCCGTCGCAGGCGGGCAAGTCGTTCCTCGTGGGCGCGCTCCTCTCGCACGAGCTCGGCTCGCTCGAGGTACTGAGTCGCGGCGGCGCCGTCGACTTCCTCAAGGAGATCAATCCGGCGAAAGGCGTCGAGTCGACCGGCGTCGTCACCCGCTTCTCCGCCTCGGCCTCGCCGCCGCTCCGCAAGGGCGACTTCTACTGCGAGCTGCTCCCGCTCGAAGGCGTGCTTCACTCGATGGCGACGGGCTTCCTCGTCGAATGCACGTCCCCCCCGCTCGACGTCGATCGCGTCGAGCGCACGCTGCGCGAGGCGCGCTTGCAGGCCGGACCTCCGGCGGCGCCGATCCACGCGCGCGCCTGGGAGTCGGTCTGGCACGAGCTCACGAAGCGCTACCAGGACCGGCATCCGTACCTGAACGAGCTCCGCCGCCATCCGGCGATGAAGGACGGGCTCGGCAAGGAGATCGGCACGTCCGCGGGTTGGGTCCTCGTCTACTCGCTGCTCTGGGGCGGCCCCGGCTACGCGAGAGATCTCGATCAGCTCATGCGCACGCTCGTGACCGGCATCGATCAGCTCGGCTACGCGGAGGCGGTCGAGGTCGGCCTCGCGCACGTGCGCGCCTCGAGCGACGCGCCGAGCGTCATCGACGCCTCGTGCCTCAATGCGCTCGGGACCTCCCGCACGATCGTGCCCGCGACGACGCTCGACGGACGCGACGTCGCGCTCGATCCCGGCGTCCTGGCCGCGCTGATCGCGGAGATCCGGCTGCCGCTCCGCGGCGTCGCCGGCTCGCTCCTCGACAAGGCGGACATCCTCGACTTCCCGGGCGGCCGCGCGCTGAAGGGCATCAACGGGTTCGGTCCCGCGGAGCTCAACACGGGCAAGCTCGAGAACGCGATCGAGGTCTACAAGCGCGGCAAGCTCACGTTCCTCTTCGAGCAATACTCGCTCGATCGCGAGATCACGTCGCTCCTCCTCTGCTCGCCCGGCCCCACCAAGCCCGAGGCGATCCAGCTCCAGTCGCAGGTCGAGAGCTGGCTGTCGATCCGTCATGGCTCGCCGACCCCGAAGGACCCGAAGGAGGTCGAGCAGCCGAGCCTGTTCCTCGCCTTGACGAAGTTCGACATGAGCCTCGGCGCGCTCCGAAGCGACAACGCGAAGGACCGCTGGGACTCGCGCGTCGACGAGGCATGCGTCGACTTCTGGGCGCGCGGCCACGGCTCGTGGCTGTTCAACTGGGGCTCGAAGGGCCGCCCGTTCACGAACCTGTTCTGGATCCGGAACCCCTACGCCGATCAGATGCAGGCGCTGAAGCCGGGCGATCCCGACTACGAGGCCGTGAAGCAGGGCTACCTCGCGTCGCGCGCGGTAGCGACGTACATCGCGTCGCCGGAGGAGAAATGGCTCGCGGTCGAGGGCTACGACCCGACGTCGTCGCTGCCGAAGAGCGGCGTCCCGCTCCTCTCGACGCACCTCCGCGCGAAGCTGAGCGAGGACATCAAGGGCAAGGAGCTCGCCCACGAGGCGCGCGCCATCCGCTCCGAGCTCCTCAGCGTGCTGAAGTCGCTCACGCCCTCACGCGACGAGGCCGAGGCCCGCGCGCGTCGAATCGAGGACGCGAAGCAGCTCGTCGAAGCGATGGGCGCGGAGATGAGCCGCCGCTGCTCCGGCGCGGTCTTCGGCGAGTTCGTCGATCTCGTCGTCGCGCCGGAAGACGACGTCGAAGCCGAGGTGCGCAAGGTCCTCGACGTCGTCATGCCGATGAGCATCAAGGCGAGCGACAAGGTGAAGAAGGTCCTCGTCCACGTGCTCAAGTGGTGGTCGAAGCTCGCGGCCGAGCGCCTCCGCGCGAGCGAGCTCGCGATCCCGCAAGCACACGCCGAGAGCTTCGTGCGCGAGGTCTGCACATCGAAGCTGATCCTGCCGGTCCTCGGCCAGGCGGTCTTCCCCTACTTCGCGCGCACGCAGGTCGACGCAGCGCTCGTCGCCACGATCCTGCGAGTGAAGATCTCCGACGCGATGCTGGCGCTGCTGACGCCCGCGAAGCGCCGGACCCCCGAGTCGCCCGTGCGCCTCAGCTACGCGGAGGACAGCGCCGAGAGCGTGGAGGCGGTCGACTGGAGCAACGTCGATTTCGACGACGAGCCCAGCACCACGGCGCAGCCGGGCAACGGCGTCTCGATCGTGTTCGCGGGCAACCGCTATTACTCGGTCTGGTCGCAGAGCCTCCCCGACTTCTACGTGAAGAGCGGCGGCACGCGACCGAGCCTGATGGAAGACGCGTCACGTACCCAGCGCCTCGTCGAGGTGCTGAAGCGCGTGGAAGTCGCCGGCGATGCCTGA
PROTEIN sequence
Length: 836
MSDPISTLEQAIGETQAAIVGQAEAENEALVLRDLALRTRKLRRAWARKQSVGVFGPSQAGKSFLVGALLSHELGSLEVLSRGGAVDFLKEINPAKGVESTGVVTRFSASASPPLRKGDFYCELLPLEGVLHSMATGFLVECTSPPLDVDRVERTLREARLQAGPPAAPIHARAWESVWHELTKRYQDRHPYLNELRRHPAMKDGLGKEIGTSAGWVLVYSLLWGGPGYARDLDQLMRTLVTGIDQLGYAEAVEVGLAHVRASSDAPSVIDASCLNALGTSRTIVPATTLDGRDVALDPGVLAALIAEIRLPLRGVAGSLLDKADILDFPGGRALKGINGFGPAELNTGKLENAIEVYKRGKLTFLFEQYSLDREITSLLLCSPGPTKPEAIQLQSQVESWLSIRHGSPTPKDPKEVEQPSLFLALTKFDMSLGALRSDNAKDRWDSRVDEACVDFWARGHGSWLFNWGSKGRPFTNLFWIRNPYADQMQALKPGDPDYEAVKQGYLASRAVATYIASPEEKWLAVEGYDPTSSLPKSGVPLLSTHLRAKLSEDIKGKELAHEARAIRSELLSVLKSLTPSRDEAEARARRIEDAKQLVEAMGAEMSRRCSGAVFGEFVDLVVAPEDDVEAEVRKVLDVVMPMSIKASDKVKKVLVHVLKWWSKLAAERLRASELAIPQAHAESFVREVCTSKLILPVLGQAVFPYFARTQVDAALVATILRVKISDAMLALLTPAKRRTPESPVRLSYAEDSAESVEAVDWSNVDFDDEPSTTAQPGNGVSIVFAGNRYYSVWSQSLPDFYVKSGGTRPSLMEDASRTQRLVEVLKRVEVAGDA*