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scnpilot_p_inoc_scaffold_3795_4

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 3185..4294

Top 3 Functional Annotations

Value Algorithm Source
rluD3; ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 233.0
  • Bit_score: 226
  • Evalue 1.10e-56
Pseudouridine synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBV3_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 233.0
  • Bit_score: 226
  • Evalue 4.00e-56
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:AKF05736.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandar similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 369.0
  • Bit_score: 290
  • Evalue 4.20e-75

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Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGCGACCCATCCTCCTCGTCGTGCCCCGGGAAGCCGAGGGGACGCGGCTCGACCGCTTCCTGGCCTCGACGCTCTCTGCGATGGAAGGCGGCCCCTCACGGACCGAGCTCCAGCGCTGGATCGAGCATGGCGGCGTCAAGGTCGACGGCGTCGCGAAGAAGGCGTCCGAGAAGCTCCGGGAGGGCGCGCGCATCGACGTCGAGCCCGAGCCGCCCCCGAAGACCGAGGCGCTCGCCGACGCCGGCGTCGAGTTCGAGGTCGTCTACATGGACGACGCCGTCATCGTGCTCGACAAGCCCGCCGGCCTCGTCGTGCATCCGGCGCGTGGCCATCACACCGGCACGCTCGTGAACGGCCTCCTCGCTCGCGGCGTGTTCGACCCGCCCGACGGTGACGAGGAGGTCGACGAGCGACCGAGCGTATCGGTCCCCGCTCTCGCGACGCCGACGAAGGGGGCGAGGGGTACGCGAGCCGGGAAGAAGGAGGCGAGCGACACCCTCGCCGACGCGATCGTGCCGGGCCTCCCGGGCGGCCCATTCGACTTCGACCTCGATCGCAGCCGACCGGGGATCGTGCATCGCCTCGACAAGGACACGAGCGGCTTGATGGTGGTCGCGCGGCATCCGCGCGCGCGAGAGCACCTGAAGGCGCAGTTCGCGACGCATTCGATCGAGCGCGAGTACGTCGCGCTCTGCGTCGGGCAAGTCGCCGCGGTCACCTTCGACACGCTTCACGGGCGGCACCCGACGGACCGCATCCGCTTCTCCTCGAAGGTGAAGACCGGCAAACGAGCGGTCACCCACGTGCGGCCGCTCGAGCAATTCGGCCCGCATGCCACCTACGTGGCGTGCCGGCTGGAGACAGGGCGAACGCATCAGATCCGCGTGCACCTCGCCGACAACCGGACGCCCATCCTCGGCGATCCGGTCTACGGCAAGCTCCCGAAGCACGCCGTCCTCCGCGAGGCGGCGATCGCCCTCGAGCGCCAGGCGCTCCATGCGCGCGTCCTCGGGTTCATCCACCCGATGACGGGGAAGGCCGTGCGCTTCGAGGTCGATCCGCCGGCGGACTTCCAGCTCGCGCTGGCGACGCTGCGCGCGATGCCCTGA
PROTEIN sequence
Length: 370
MRPILLVVPREAEGTRLDRFLASTLSAMEGGPSRTELQRWIEHGGVKVDGVAKKASEKLREGARIDVEPEPPPKTEALADAGVEFEVVYMDDAVIVLDKPAGLVVHPARGHHTGTLVNGLLARGVFDPPDGDEEVDERPSVSVPALATPTKGARGTRAGKKEASDTLADAIVPGLPGGPFDFDLDRSRPGIVHRLDKDTSGLMVVARHPRAREHLKAQFATHSIEREYVALCVGQVAAVTFDTLHGRHPTDRIRFSSKVKTGKRAVTHVRPLEQFGPHATYVACRLETGRTHQIRVHLADNRTPILGDPVYGKLPKHAVLREAAIALERQALHARVLGFIHPMTGKAVRFEVDPPADFQLALATLRAMP*