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scnpilot_p_inoc_scaffold_10877_2

Organism: SCNpilot_P_inoc_Myxococcales_68_7

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 7 ASCG 14 / 38 MC: 1
Location: 901..1308

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein Vgr n=1 Tax=Variovorax paradoxus RepID=UPI000367CA2E similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 89.0
  • Bit_score: 64
  • Evalue 1.30e-07
putative type VI secretion system protein, Vgr family similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 51.0
  • Bit_score: 63
  • Evalue 6.10e-08
Putative type VI secretion system protein, Vgr family {ECO:0000313|EMBL:AGU47743.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 51.0
  • Bit_score: 63
  • Evalue 3.00e-07

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGATCGAGATCCGCCTCCGTGCTGCTGCGTCGAACCCGGCGTCGCGCCCCTGGCGTCGGGGCATCTCGCTCGCCGCGCTCGCGCTTGGCGTCGTCGCGCCGGTCGCTACGAGCCGCGCGCAGGATGCCGCCCCGGCCCTGCGGTCGGCGACGCAGGAGCTCGCGGACGTGCGGGCGCTGAAGGTGGTGACCATCGACGGCGGCAAGGCGGTTGCGATCGACGGCGGCGAGTCGATCTCGATCACGTCGGGAGCGGCGAGCATCACGATGAAGAAGGACGGGACGATCGTCATCAAGGGGACCGACGTCGTCATCGACCGTGCGAACGAGGTGACGACGACCCCGGCGAACGGCGCGCCGCCGTGCACGCAGACGCCGCGTGGATCTCGGATGTCCGAGATCTTCTGA
PROTEIN sequence
Length: 136
MIEIRLRAAASNPASRPWRRGISLAALALGVVAPVATSRAQDAAPALRSATQELADVRALKVVTIDGGKAVAIDGGESISITSGAASITMKKDGTIVIKGTDVVIDRANEVTTTPANGAPPCTQTPRGSRMSEIF*