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scnpilot_p_inoc_scaffold_1461

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1461_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..1874)
DNA (1872bp) protein (624aa)
Flagellar hook-associated 2 domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T210_ACIDE rbh
Flagellar hook-associated 2 domain protein {ECO:0000313|EMBL:EER61500.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
flagellar hook-associated 2 domain-containing protein
scnpilot_p_inoc_scaffold_1461_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2083..3636)
DNA (1554bp) protein (518aa)
Flagellin domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T211_ACIDE
Flagellin domain protein {ECO:0000313|EMBL:EER61501.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldi
fliC3; flagellin
scnpilot_p_inoc_scaffold_1461_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3892..5460
DNA (1569bp) protein (523aa)
Flagellin domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T211_ACIDE rbh
Flagellin domain protein {ECO:0000313|EMBL:EER61501.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldi
fliC2; flagellin
scnpilot_p_inoc_scaffold_1461_4
unknown

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5702..6619
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00037DED8F
scnpilot_p_inoc_scaffold_1461_5
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6643..7254
DNA (612bp) protein (204aa)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-R
cysC; adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CLM3_9BURK
scnpilot_p_inoc_scaffold_1461_6
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7251..8021
DNA (771bp) protein (257aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:BAN53242.1}; EC=2.7.7.33 {ECO:0000313|EMBL:BAN53242.1};; TaxID=1211579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadale
glucose-1-phosphate cytidylyltransferase id=12553379 bin=BDI species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
scnpilot_p_inoc_scaffold_1461_7
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8012..9079
DNA (1068bp) protein (356aa)
CDP-glucose 4,6-dehydratase id=12553380 bin=BDI species=Pseudomonas mendocina genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KFX70172.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas t
CDP-glucose 4,6-dehydratase
scnpilot_p_inoc_scaffold_1461_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9076..10401
DNA (1326bp) protein (442aa)
lipopolysaccharide biosynthesis protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003688C2F rbh
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis {ECO:0000313|EMBL:GAD23917.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacte
DegT/DnrJ/EryC1/StrS aminotransferase
scnpilot_p_inoc_scaffold_1461_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10419..11528
DNA (1110bp) protein (370aa)
N-acetylneuraminic acid synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036A61B3 rbh
N-acetylneuraminate synthase {ECO:0000313|EMBL:GAD23916.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
N-acetylneuraminic acid synthase domain-containing protein
scnpilot_p_inoc_scaffold_1461_10
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11529..13340
DNA (1812bp) protein (604aa)
Thiamine pyrophosphate enzyme TPP binding domain protein n=1 Tax=Pseudomonas putida (strain F1 / ATCC 700007) RepID=A5W0I1_PSEP1 rbh
thiamine pyrophosphate binding domain-containing protein
Thiamine pyrophosphate enzyme TPP binding domain protein {ECO:0000313|EMBL:ABQ77641.1}; TaxID=351746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo
scnpilot_p_inoc_scaffold_1461_11
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13605..14483
DNA (879bp) protein (293aa)
Methyltransferase FkbM family n=2 Tax=Pseudomonas putida RepID=A5W0I2_PSEP1
FkbM family methyltransferase {ECO:0000313|EMBL:KGK26802.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas p
FkbM family methyltransferase
scnpilot_p_inoc_scaffold_1461_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14581..15537
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F7209
Uncharacterized protein {ECO:0000313|EMBL:GAD23912.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
NAD-dependent epimerase/dehydratase
scnpilot_p_inoc_scaffold_1461_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15534..16403
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000364AD9F rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD23911.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
scnpilot_p_inoc_scaffold_1461_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16406..17071
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036AE057
Predicted phosphatases {ECO:0000313|EMBL:GAD23910.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;
haloacid dehalogenase domain protein hydrolase
scnpilot_p_inoc_scaffold_1461_15

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17359..18825
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036456D6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN44084.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1461_16
Brachyspira intermedia, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

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18822..19979
DNA (1158bp) protein (386aa)
Radical SAM domain protein n=1 Tax=Brachyspira intermedia (strain ATCC 51140 / PWS/A) RepID=G0EQH3_BRAIP rbh
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:AEM22074.1}; TaxID=1045858 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira intermedia (strain ATCC 511
scnpilot_p_inoc_scaffold_1461_17
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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20010..23609
DNA (3600bp) protein (1200aa)
glycosyl transferase family protein id=12553393 bin=BDI species=Acidovorax citrulli genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
O-antigen biosynthesis protein {ECO:0000313|EMBL:EZH79046.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovora
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_1461_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23819..24679
DNA (861bp) protein (287aa)
MotA/TolQ/ExbB proton channel n=2 Tax=Alicycliphilus denitrificans RepID=E8TSX3_ALIDB
flagellar motor stator protein MotA
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ADV01574.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
scnpilot_p_inoc_scaffold_1461_19
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24713..25648
DNA (936bp) protein (312aa)
OmpA/MotB domain protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TVG1_ACIAC
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ABM34949.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (
Displaying 19 items

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